Peribacillus frigoritolerans: L8956_12900
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Entry
L8956_12900 CDS
T08180
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri00630
Glyoxylate and dicarboxylate metabolism
pfri00680
Methane metabolism
pfri01100
Metabolic pathways
pfri01120
Microbial metabolism in diverse environments
pfri01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L8956_12900 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
L8956_12900 (fdhF)
Enzymes [BR:
pfri01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
L8956_12900 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molybdop_Fe4S4
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_10
Fer4_21
Fer4_2
Fer4_6
Fer4_8
Fer4_9
Fer2
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ULM99493
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All DBs
Position
complement(2715725..2718688)
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AA seq
987 aa
AA seq
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MPEKVHIKINGAETSLEGNQTILQMLTDSSIEVPNVCYHPSLGPIETCDTCLVSVNGELV
RSCSTKIKDGDVIDTVGPEVKEAQVMAMDKILYNHELYCTVCDYNNGTCEIHNTVKEMKV
NHQSVPFDQKPYEVDRTNPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWEAKRPRVIW
DDNVPINESSCVSCGHCSTVCPCNAMMEKGMEGEAGFLTGIAKQTLRPMIEITKNVETGY
GSILAISDMESAMRDARIKKTKTVCTYCGVGCSFDVWTKDRKILKIEPQVEAPANGISTC
VKGKFGWDFVNSEERLTKPLIREGDAFREAEWEEALELISRKFTDIKDSHGPDSMAFITS
SKCTNEESYLMQKLARGIIGTNNVDNCSRYCQTPATLGLFRTVGYGGDTGGIKDIENSEL
VLIIGSNTSESHPVLATRIKRSHKLGKQKLIVADIRKHEMADRSDLFIQPAPGSDMIWLS
AVTKYIVDKGWTDKDFIKNRVNGMEEYIKTLEPYTMDYAEKVTGVAKEDLITLAKAIHEA
GSVAALWAMGVTQHGGGSDTSTAISNLLLITGNYGKPGTGTYPLRGHNNVQGASDFGSMP
DRLPGYEKVTDKKVRAKYENIWGTKIPENPGLNNHEMVEGIHSGTIKAMYLKGEDMGLVD
SNINHVHKAFEKLDFFVVQDIFLSRTAEFADVVLPASPSFEKEGTFTNTERRIQRLYQVF
EPLGDSKPDWQIIMNVANSLGAGWEYRHPSDIMEEAAKLSPLYAGVSYERLEGYKSLQWP
VASDGIDTPLLFTDVFPFPDGKARLFPVEWTKPIDFGDEFDIHVNNGRLLEHFHEGNMTY
KSKGISSKTPKVFLEVSRELAKDRGLEDGTLVRLTSPYGHAKVECLITDRVKGKEVYLPM
NDSGDGAINQLTSSHSDKDTDTPAYKEVQAKMEVLRIKGDNPLPSINHRNGNPQPQMGVQ
VQKKWAREDYIFPGDLLKIKKEERNRG
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
ttgccagagaaagtgcatataaaaatcaatggtgctgagaccagtctggaaggtaatcaa
acaatattacaaatgctgacggatagctccattgaagtcccgaatgtttgttaccaccct
agcctaggtcctatcgaaacatgtgatacatgtttagtgagcgttaatggggaactagtt
agatcttgttccaccaagatcaaagatggagatgtaatcgatacagttggaccagaggta
aaagaagcacaggtcatggcgatggacaagatattatataaccatgaactttattgtacg
gtttgcgattataataatggcacttgtgaaatacacaataccgttaaggaaatgaaggta
aatcatcaaagtgttccttttgatcaaaaaccctatgaagtggatcggacaaatccattc
tatcgatatgacccagatcaatgcatcctttgcggccgttgtgttgaagcttgtcaagat
gtacaggtcacagaaacattgactattgattgggaagcaaaacgtccgcgtgtcatttgg
gatgataatgttccgatcaatgaatcttcatgtgtgtcatgtgggcactgttccacagtt
tgcccgtgtaatgcaatgatggaaaaagggatggagggtgaagccggatttttaactggc
atcgctaaacaaactcttcgacctatgatagaaattacgaaaaatgttgaaacgggttat
ggctcgattttagcgatttcagatatggaatccgccatgagggatgcaaggatcaagaag
acaaaaacggtttgtacatattgtggtgtaggatgcagctttgacgtttggaccaaagac
cgtaaaatccttaagatcgaaccgcaagtggaggcacctgcaaatggaatttcgacttgc
gttaaagggaaattcggatgggatttcgtgaatagtgaagaaagactaactaaaccttta
attagagaaggggatgcgttcagagaggctgaatgggaagaagcccttgaattaatttcc
cgtaaattcaccgacatcaaggattctcacggtccggattcgatggctttcataacgtct
tccaaatgcaccaatgaagagtcctatttaatgcaaaaactggctaggggcatcatcggc
acgaataatgttgataactgttcccggtattgtcagacaccggctactttgggactattc
agaacggttggatatggtggagatacagggggcataaaggatatcgaaaattccgaactt
gtattgatcataggctccaatacatccgaatcacatcccgtgttggctacaagaatcaag
cgttcccataaactggggaaacagaagctgatagtcgcagacatcagaaagcatgaaatg
gctgaccgttccgacctcttcatccagcctgctccgggatcggatatgatatggctatcg
gccgtcactaaatatatcgtcgataaaggttggacagataaagacttcattaaaaatcgt
gtaaatgggatggaggaatatatcaagactttagaaccctacacaatggattatgcggaa
aaagtaacaggcgtagctaaggaagatttaattacgttggcaaaagccattcatgaagcg
ggaagcgttgcagcgctttgggccatgggcgttacccagcatggcggaggaagtgatacg
agtactgcaatttccaatttattgctcataacgggcaactacggtaaacctggaacaggc
acttaccctttacgcggacataataatgtacaaggtgccagtgactttggcagtatgccg
gatcgcttgccaggttatgaaaaagtaacggacaaaaaggtacgagcgaaatatgaaaac
atctggggtacaaaaatacccgaaaaccctggccttaataatcatgaaatggtcgaaggg
attcattcaggtaccattaaagccatgtacttaaaaggtgaagatatgggtctggtcgat
tcgaatatcaatcatgtccataaagcatttgaaaaactggacttctttgtggtacaagat
atcttcttatcaagaacggctgaattcgcggatgtcgttcttccagcaagcccaagcttt
gaaaaagaaggtaccttcacgaataccgaacgccgtatacaacgcctgtatcaagtcttt
gaaccgcttggcgactcaaagcctgattggcaaatcattatgaatgtggcgaattcgtta
ggagcggggtgggagtatcggcatccaagtgacatcatggaagaagcagctaaattatcg
cctttatatgctggagtaagttacgaacgtttggaaggttataaaagtcttcaatggcca
gttgcttcagatggtatagatactccattgttattcacggatgtttttccgtttcccgat
ggaaaagcgaggttatttccagtcgaatggaccaaaccgattgactttggggatgagttt
gatatccatgtaaataatggccgcttattggaacatttccatgaaggaaacatgacatat
aaatcaaaaggcatcagttccaaaacgccaaaggtcttccttgaggtatcccgggaattg
gcaaaagatagagggcttgaggatggcacccttgttcggctcacttcaccgtatggacat
gcaaaagtggaatgtctgattacggatcgtgtaaaaggtaaagaagtttatcttccgatg
aacgattcaggtgacggggccatcaaccaattgacaagcagccattcagataaagatact
gatactcccgcctataaggaagttcaagcaaaaatggaagttcttaggatcaaaggagac
aatccattgccgagcatcaaccatcgtaatgggaatcctcaaccgcaaatgggtgtacaa
gtacaaaaaaaatgggcccgcgaagattatatattccctggtgacctcttgaagatcaaa
aaggaggagaggaaccgtggctaa
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