Peribacillus frigoritolerans: L8956_16425
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Entry
L8956_16425 CDS
T08180
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri00300
Lysine biosynthesis
pfri00470
D-Amino acid metabolism
pfri01100
Metabolic pathways
pfri01110
Biosynthesis of secondary metabolites
pfri01120
Microbial metabolism in diverse environments
pfri01230
Biosynthesis of amino acids
Module
pfri_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
pfri_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L8956_16425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L8956_16425 (lysA)
Enzymes [BR:
pfri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
L8956_16425 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ULM95438
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Position
complement(3483042..3484370)
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AA seq
442 aa
AA seq
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MHLYGTGGVNERGHLEIGGVDTIELIEQFGTPLYVYDVELIRERARGFKRTFEELGVSAQ
VAYASKAFSSIAMIQLAEQEGLSLDVVSAGELYTAIKANFPTERIHFHGNNKSEEELHMA
LDHDIGCIVVDNFSELTLLEEICTNREQKVKILLRVTPGIEAHTHDYILTGQEDSKFGFD
LINGQAEAALRQALHSEFLEVLGLHCHIGSQIFQTTGFLLAAQKIIGKLSDWHDSVGFQP
QVLNLGGGFGIRYTQEDDPLPASQYVEEIVREVQNLIADSDLVMPEIWIEPGRSLVGDAG
ATLYKVGSEKEVPNVRKYIAVDGGMSDNIRPALYEAKYDAILANRPLDPVEETVSIAGKC
CESGDMLIWDLPLPKAGRGDVLAVFCTGAYGYSMSNNYNRIPRPAVVFAEKGEARLVIKR
ETYEDLIHLDLALHEAAVVNKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtacggaaccggcggtgtcaatgaacgtggacatctggagattggcggagtg
gacacgattgaattgatcgaacaatttggtacaccattatatgtttatgatgtagagcta
attcgcgaacgggcgagggggttcaagagaacttttgaggaattgggggtttcagcacaa
gttgcttacgcaagtaaggccttttcttcgattgccatgatccagttggctgagcaagag
ggactgtctctcgatgttgtctcagcgggggaattatatacggcaattaaggcaaatttc
ccaacagaacggattcacttccatggaaataacaaaagtgaagaagagctacatatggct
ttggatcatgacattggctgtatagtagtcgataatttttcagagttgacactgttggaa
gaaatttgtacaaaccgtgaacaaaaggtgaaaatccttcttcgtgtaacaccgggtatt
gaagcccatacgcatgattatattttgacagggcaagaagattcgaaatttggttttgat
cttattaacggccaggcagaagctgcccttcgacaagcgcttcatagtgagtttctggaa
gttcttggattacactgccatatcggttcccaaatctttcaaacgaccggtttccttctg
gcagcccaaaaaattatcggcaagctgagtgattggcacgattcggtagggtttcaacca
caggtattgaatctgggagggggattcgggattcggtatacacaagaggacgacccgcta
ccggcgtctcaatatgttgaggagatcgttagggaagtgcagaacctgattgctgattct
gatttagtgatgcctgaaatctggatcgaacctggccgttcattggtcggagacgccggt
gcgacactgtacaaggtgggttctgaaaaggaagttcctaatgtccgtaaatatattgcc
gtagatgggggcatgagtgataatatacgtcccgctctttacgaagctaaatatgatgcc
attcttgcaaaccggccgctcgaccctgtggaagagacagtgtccattgccggaaaatgc
tgtgaaagcggagatatgttgatttgggatttaccattgccaaaagccggccgcggtgat
gtcttggcggtattttgtacaggggcatatggatattccatgtcgaataattacaatcgc
attccgagaccggctgtcgtgtttgccgaaaagggagaagcccggttggtcatcaaacgc
gaaacttacgaagatcttatccatttggacttggcccttcatgaagcggcagtcgtcaat
aaagaatag
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