Peribacillus frigoritolerans: L8956_17220
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Entry
L8956_17220 CDS
T08180
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pfri
Peribacillus frigoritolerans
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfri03019
]
L8956_17220
03009 Ribosome biogenesis [BR:
pfri03009
]
L8956_17220
Enzymes [BR:
pfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L8956_17220
Messenger RNA biogenesis [BR:
pfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L8956_17220
Ribosome biogenesis [BR:
pfri03009
]
Prokaryotic type
rRNA helicases
L8956_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ULM95580
LinkDB
All DBs
Position
complement(3630413..3631726)
Genome browser
AA seq
437 aa
AA seq
DB search
MKQNQFERFNLKSYILDAVRTLGFDKPTEIQERVLPSLLKGSSLIGQSQTGTGKTHSYLL
PIMNRLDAGKNEVQAIISAPTRELANQIYKEALKIADHFPEDEQIQVRCFIGGTDKQRMI
DKLKTQPQLVIGTPGRIKDLVEAQALQVYTAKMLVVDEADLMLDMGFIEDVDLFASRMAE
KIQMLVFSATIPEKLKPFLNKYMENPKYVQVNPKQATASKIEHVLVPLRHRNKEQLLHDI
IVRYNPYLAIIFTNTKKMADHVANSLIEKGLNVGRIHGDLTPRERKKMMKQINDLEYQFI
VATDLASRGIDIEGVSHIINYELPSDLDFYIHRTGRTARAGYSGIATTIYDTSDEDALNR
LEKMGIEFRDADIQNGDWVDIDERNKRKNRKKQKSDIDVKASRHIKKPTKVKPGYKKKIQ
RDVENFKKRERRIQRKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatcaatttgaacgatttaatttgaaaagctacattctagatgcggttcgt
actttagggttcgataagccgacggaaattcaagagcgcgtgcttccgtcgcttttaaag
ggaagtagcttaattggacagtcgcagacaggtacaggaaagacacattcctatttgctg
ccgatcatgaacaggcttgatgctggtaaaaatgaggttcaagcgattatttccgcacca
acccgtgagttagcgaaccaaatctacaaagaagctttgaaaattgctgaccatttccct
gaggatgagcagattcaagtccgttgtttcatcggtggtactgataaacagcgaatgatc
gataaattgaagacacagccgcaattggtaattggtacgccgggccggatcaaggacttg
gttgaagcccaggcattacaggtgtatacagcaaaaatgcttgtagtcgatgaagcggat
cttatgcttgatatgggattcatagaagatgtcgatttatttgcatcacgtatggctgaa
aaaattcaaatgcttgtcttttcggcaaccatcccagaaaaattgaagccgtttttgaat
aaatatatggagaatccaaagtatgttcaggtgaatcccaagcaggcgaccgcttcgaaa
atcgaacatgttctcgtaccgcttcgccaccgtaacaaagagcagttgcttcatgacatc
atcgttcgttataatccatatttggcgatcattttcacgaacacaaagaaaatggcggac
catgtggctaattccttgatcgaaaaagggttgaatgtcggccgaattcatggggattta
acgcctcgtgaacgtaaaaaaatgatgaagcaaatcaatgatttggagtatcaattcatc
gttgcgactgatctggcttcccgtggaatcgatattgaaggtgtaagtcatattattaac
tatgaattgccttcagatttggatttttatatccataggacgggcaggacggctcgtgca
ggatattcaggcattgccactaccatttacgatacttccgatgaagatgcattgaaccgc
cttgaaaaaatgggcatcgagttccgtgatgccgatatccaaaacggtgattgggttgat
atcgacgagcgtaataaacggaaaaaccgtaaaaaacaaaaatctgatatcgatgttaaa
gcgagcaggcacattaagaagccaactaaagtcaagccaggatacaagaagaaaattcaa
cgagatgtggaaaactttaaaaaacgcgaacgtcgtatacagagaaagaaatag
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