Peribacillus frigoritolerans: L8956_17440
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Entry
L8956_17440 CDS
T08180
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03030
DNA replication
pfri03430
Mismatch repair
pfri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8956_17440 (holA)
03430 Mismatch repair
L8956_17440 (holA)
03440 Homologous recombination
L8956_17440 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfri03032
]
L8956_17440 (holA)
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_17440 (holA)
Enzymes [BR:
pfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8956_17440 (holA)
DNA replication proteins [BR:
pfri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L8956_17440 (holA)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L8956_17440 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ULM95619
LinkDB
All DBs
Position
complement(3675682..3676695)
Genome browser
AA seq
337 aa
AA seq
DB search
MVLDVWKSIKKGQFAPVYLLYGTEAYLINETKQLLIDNVLHEDEMDFNFSQFDLEETPVE
TALEDVETLPFIGERRLVFMQNPFFLTAEKTKSRVEHNVKRLEAYLADPVPYSIVVLTAP
YEKLDERKKITKELKRKAVLVEAKKLGDHELKGWVKERVEASSVRIDEQATELLLELAGT
NLMMLTNELDKMVLYTEAEKHITVEVVEKLVAKSLEQNIFTLVDHVLQRKMESAMTILHD
LLRQNEEPIKILSVMAGQVRLMYQVKELSRQGYSQQKIAGQLKVHPYRVKLALEKTGKFQ
ERELLSIMNDLAEADYKMKTGQADKAITLELLLLKIR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttggtattagacgtttggaaaagtataaaaaaagggcaattcgcgccagtatacttgtta
tatgggacggaagcctatctaattaatgaaacgaagcagctattgatcgacaatgttctt
catgaagatgagatggattttaacttttctcaatttgatttagaagagacgcctgttgaa
actgcgcttgaagatgtcgaaaccctcccgtttatcggggaaaggcgccttgtcttcatg
caaaacccattttttttgacagctgaaaaaacgaagtcaagagttgagcataatgtgaaa
agactggaagcgtatttggctgacccggttccatattctattgtcgtattgaccgcacct
tatgagaaactggatgaacggaaaaaaatcaccaaggaactgaagcgtaaggcggttctc
gttgaagcgaagaagcttggtgatcatgagttaaaggggtgggtgaaggagagggtcgaa
gcttcttcagtccgaatagatgagcaggctacagagcttttacttgaacttgcaggaacg
aatctgatgatgctgacgaatgaactggataaaatggtgctttatacggaagctgagaag
catattacagtcgaggtagtggaaaagctggtcgcaaaatcccttgaacagaatatcttc
acacttgttgatcatgtgttacagagaaaaatggagagtgccatgacgatactgcacgat
cttctcaggcagaatgaagagccgatcaagatcttgagtgtcatggcaggtcaggtcagg
ctcatgtatcaagtgaaggagctttcccgtcagggctatagccagcaaaaaattgcgggt
caactgaaggtgcacccttacagggtaaagctggcacttgaaaagacggggaaattccag
gaacgcgagttgttgagcatcatgaacgacttagcggaagcggattataaaatgaagacc
ggccaagcagataaggcaatcacgcttgagctgctgcttttaaaaattagatga
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