Peribacillus frigoritolerans: L8956_18750
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Entry
L8956_18750 CDS
T08180
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03030
DNA replication
pfri03410
Base excision repair
pfri03420
Nucleotide excision repair
pfri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8956_18750 (polA)
03410 Base excision repair
L8956_18750 (polA)
03420 Nucleotide excision repair
L8956_18750 (polA)
03440 Homologous recombination
L8956_18750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfri03032
]
L8956_18750 (polA)
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_18750 (polA)
Enzymes [BR:
pfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8956_18750 (polA)
DNA replication proteins [BR:
pfri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L8956_18750 (polA)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L8956_18750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8956_18750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ULM95853
LinkDB
All DBs
Position
complement(3952158..3954782)
Genome browser
AA seq
874 aa
AA seq
DB search
MDKKLVLIDGNSIAYRAFFALPLLNNDKGVHTNSVYGFTMMLNRILEEEKPTHILVAFDA
GKTTFRHASFKEYKGGRQKTPPELSEQFPFIRELLDCFQIKRYELENYEADDIIGTLSLQ
AEKDGFEVKVISGDKDLTQLSSPSTTVSITKKGITEIEEYTPKHIHEKYGLSPLQIIDLK
GLMGDASDNIPGIPGVGEKTALKLLHQFETVENLLQSIDEVNGQKLKEKIEEHKDLALLS
KELATITREAPLEVSVNETEYTGMDQDRVISFYKELGFSTLLDKLDVTESAPLEQEKIEV
HTAEMTEGMFADESALYVEILEDNYHRADIIGIAISNEQGHFYFNGEDALSSDAFKSWAE
DETKKKTVFDAKRTVVALRHRGVEIKGIDFDVFLASYILDPAESVDEVAEITKTQGTIRL
ETDDVFYGKGAKRKIPEEAELREHIARKSKAIFSLKEPMIDKLQEFEQYHLFTELELPLS
IILANMEWQGIKVDIGRLKNMGQELAIRLRNIEARIFELAGEAFNINSPKQLGAILFEKL
ELPVMKKTKTGYSTSADVLEKLESKHDIVKEILLYRQLGKLQSTYIEGLLKVVNGKTDKV
HTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWIIFAADYSQIELRVL
AHIANDSGLVEAFQAGMDIHTRTAMDVFHVSADQVTSNMRRHAKAVNFGIVYGISDYGLS
QSLGITRKEAGEFIEKYLRSFPGVREYMEESIHEARQKGYSTTLMQRRRYIPEITSRNFN
IRSFAERTAMNTPIQGSAADIIKLAMINMNKRLKKEGLKTRMLLQVHDELIFETPPEELE
ILKVIVPEEMENAIELNVPLKVDYAFGPTWFDAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaaagctagtgctcatagatggaaacagcattgcataccgtgcgttttttgcg
cttccgctcttgaataatgataagggggtccatacgaattccgtgtacggattcaccatg
atgctcaaccgcattcttgaagaagaaaagccaacgcacatacttgtggcattcgatgcg
ggtaaaacgacattcaggcatgcatcatttaaagaatataagggggggcgccaaaaaacg
ccgccagaattatccgagcaattccctttcattcgggagctgcttgattgttttcaaata
aaaaggtatgaactggagaactacgaagccgatgatattatcggtacgctgtctttacaa
gcggaaaaagatggttttgaagtgaaggtcatttccggtgataaggatttaacgcaatta
tcctcccctagtacgacagtttccatcacgaaaaaggggattactgaaattgaggaatac
actccaaagcatatacatgaaaaatacggtctatcccctttgcaaatcattgatttaaaa
gggctgatgggagatgcctccgacaatatccccggtattccgggtgttggtgaaaagact
gcccttaaattattgcatcaatttgaaacggttgaaaaccttctgcagtcgattgatgag
gtaaacggacaaaaattgaaagagaaaattgaagaacataaagacctggccttattaagc
aaagagcttgctacgataacgagggaagcgccgcttgaagtttccgttaacgagaccgag
tacactggcatggatcaggatcgagtcatctcattctataaggagcttggtttttcgact
ttactcgataaattggatgtaacggaaagcgcaccgcttgaacaggagaagatagaggtg
cacactgctgaaatgacagaaggaatgtttgcagatgaaagtgccttgtatgttgaaatt
ttagaagataattatcatcgagccgacataatagggatcgccatcagtaatgaacaaggt
catttttacttcaatggagaggatgctctgagttccgatgcatttaaatcctgggcagag
gatgaaacaaaaaagaaaacggttttcgatgcgaagcgtacggtcgtggcactgcgtcat
cggggagtcgaaataaaaggcatcgattttgatgtgtttttggcatcctatatccttgat
ccggcagagtcagtggacgaagtcgcagaaatcacgaaaacccaaggtactatccggctt
gaaacagatgatgttttttatggaaaaggtgcaaaacgcaaaatacctgaggaagcggaa
ttgagggagcatatcgccagaaaatcgaaggcgatcttttctctgaaagaaccgatgata
gataagctgcaagagttcgagcagtatcacctatttacggaactggagctgcccttgtcg
atcatcctggcaaatatggaatggcagggaatcaaggtggacataggccgactgaaaaac
atgggacaggaattagccattcgcttaagaaatatcgaagcgcgaattttcgaattggct
ggagaggcgttcaatatcaattcacctaaacagcttggggccatcctgtttgaaaagttg
gagcttccggtcatgaagaaaaccaaaacaggttattcgacttcagccgatgtattggaa
aaactggagagcaagcatgatatcgttaaggaaatactgctgtatcgccagcttggtaag
ctgcaatccacttacattgaaggattgcttaaagtggtcaatggcaaaacggacaaggtg
cacacccggttcaaccaagcattgacccagaccggccggttaagttctacagatcccaat
ctccagaatatcccgatcagactggaagaaggaaggaaaatcaggcaggccttcattcct
tccgaaaaggattggatcatttttgctgccgactactcccaaatcgaattacgtgtcctg
gcgcatatcgccaatgacagcggattggtggaagcattccaggccgggatggacatccat
acaaggacagccatggatgtattccatgtatcggcagatcaagtcacctcgaacatgagg
cgccatgccaaagcggtcaacttcggaatcgtttatggtataagtgattacggactatcg
caaagtcttggaatcacgagaaaagaagctggagagttcatcgagaagtatttacgaagc
tttccaggtgttcgggaatatatggaagaaagcatacatgaggcccgtcaaaaaggatat
agcacgactctgatgcaaagaaggcgatatatacctgagataacaagcaggaatttcaac
atcaggagttttgccgaacggacagcgatgaacacgccgattcaaggcagtgccgctgat
atcatcaagcttgccatgatcaacatgaataaacgcctgaaaaaggaggggctcaaaacg
agaatgcttctacaggttcatgatgaattgatttttgaaacccctcctgaggaactcgaa
atccttaaagtgatcgttccggaggaaatggaaaatgccattgaattgaacgtgcccctt
aaagtggattatgctttcgggccaacatggtttgatgccaaataa
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