Peribacillus frigoritolerans: L8956_20730
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Entry
L8956_20730 CDS
T08180
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03420
Nucleotide excision repair
pfri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L8956_20730
03430 Mismatch repair
L8956_20730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_20730
Enzymes [BR:
pfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8956_20730
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8956_20730
MMR (mismatch excision repair)
Other MMR factors
L8956_20730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
PhoH
AAA_30
DEAD
AAA_22
NACHT
ResIII
AAA_16
NPHP3_N
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ULM96209
LinkDB
All DBs
Position
complement(4376467..4378806)
Genome browser
AA seq
779 aa
AA seq
DB search
MNNEIRQEQERLNEVIETITKQISKIEGETSKRKKEVVNIRKHFWDDLKVNIDTFDDYLE
TIIGLRQQAQDLSQSEGAHRYAFKRLSTLRRMQEVPYFGRIDITEEGSPLTEQIYIGTST
LTDATGENFIIYDWRAPVSSVYYDYPPGPVEYSTPGGVIRGMLENKWQYTIKGGVIESMF
DTSLTIGDEILQQVLGKGTDKHMHSIVSTIQREQNRIIRNDRGRLLIVQGAAGSGKTSAA
LQRIAYLLYKNRERLKADQIILFSPNSLFNNYVSNVLPELGEENMQQVTFQEYLDHRLTD
SFQVEDPYEQLEYLLTGAEDPSYSTRTASIQFKASIRFFEIIKTYRQSLEQSGMIFRGVK
FRGETLVSAKQISERFYNTDTTLRFHNRIEKLKEWLCELLDEREKFELKQPWVEEEIEYL
SKEDYQKVYTYLEKKRGHDEDSFDDYEIENKMLARMIVRKKLKTLRKRIKALHFINIKGI
YKQLFDERIRIELWNEGEAPAEREICLSTQKMLDEGKLYYEDATPFLLLKELIQGFQSNT
SIKYVLVDEAQDYSPFQFEFLKRLFPSARMTVLGDFNQAIFAHASERVDFQTLTSLYGIS
ETESITLEQSYRSTKQIIEFTRELIPEGHRIKAFNREGEKPILTQVSSRDELHRKIMSKV
KDFQSREYNTIAIICKSAAESAAAYDALNAHGEIKLVQKGTNEYEQGVVVIPAYLAKGIE
FDAVIIYDASMQTYGDESLRRLFYTACTRAMHDLQIYTVGEPSPFLKNSAAESSLLTSN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaaattcggcaggagcaagaacgtttgaatgaggtgatagaaacaatcacg
aaacaaatcagcaaaatagaaggagaaacttcaaagcgtaaaaaagaagttgttaatatc
cgtaaacacttttgggatgacctcaaggttaatatcgatactttcgatgattacctcgag
accatcattggcttaaggcagcaggctcaagacttgtcacaaagcgaaggcgcacataga
tatgccttcaagaggctgtcaacactgcgccgtatgcaggaagttccttatttcggccgg
attgatatcactgaagaagggtctccccttacggaacaaatttatattgggacttccact
cttactgatgcaacaggagaaaacttcattatctacgattggagggccccggtttcgagt
gtttattatgactatcctcccggtcctgtagaatactccactcccggaggcgtaattcgg
gggatgctggagaacaagtggcaatacaccatcaagggcggcgttatcgaatcaatgttc
gatacgagtctcaccattggggatgagatcctgcagcaggtactgggcaagggaacggat
aagcatatgcacagtatcgtgtccaccattcaacgtgagcaaaataggatcatccggaac
gatcgcggacgtctgctcattgttcaaggtgctgctggcagcgggaagacatcagctgcc
cttcaacggatcgcttacttgctctacaagaaccgtgaaaggctgaaagccgatcaaatc
attttattctctcctaactccttgtttaataactacgtatccaatgtgttgcccgaactt
ggcgaagagaatatgcagcaggtaacattccaggaatatctggatcatcgtctgactgac
tcgtttcaagttgaggatccttatgagcaactggaatatttgctgactggagcggaggat
ccttcctatagcaccaggacagcgagtatccaatttaaggcatccattcgcttctttgaa
atcatcaagacctacagacaatcactggagcaatccggaatgatctttagaggggtaaag
ttccgaggggaaacgctcgtctccgccaaacaaatctcggaaagattttataacacagac
accacattaagatttcacaataggattgaaaagctgaaagagtggttatgtgagctactt
gatgaaagggaaaagtttgagttgaaacaaccttgggtcgaggaggaaatcgagtatctt
agcaaagaagactaccaaaaggtatacacctatttagagaaaaaacgcggccatgatgaa
gattcctttgacgattatgagatagaaaataaaatgcttgcgcgtatgattgttcgaaag
aaattgaagacgttacgcaaacggataaaagcacttcattttatcaatattaagggcata
tacaagcaactttttgacgaacgaatacggatcgaactgtggaatgagggtgaagcacct
gccgaaagggaaatttgcttatcaacccaaaaaatgctggacgaaggtaaactgtattat
gaagacgcgactccatttttgctgctgaaggagttaattcaaggattccagtcgaatact
tctataaaatatgtgcttgtagacgaagcacaggattattctccatttcaattcgagttt
ttgaaacgattgtttccctctgccaggatgaccgtactcggtgactttaaccaggcaata
ttcgctcatgccagcgaacgggtggatttccagactcttaccagtttatacgggataagt
gaaaccgagagcattaccttggaacaaagctacagatccacaaagcagattatagaattc
acacgtgaactaattccagaaggccatcgaattaaggcattcaatcgtgaaggcgagaag
ccaatactcactcaagtgtccagccgtgatgaattgcaccgtaagatcatgtctaaggtc
aaagactttcaaagccgtgagtacaatacaatcgcaataatctgtaaatctgctgccgaa
agtgccgccgcatacgatgcccttaatgcccacggtgaaattaaactcgtacagaaaggc
acaaatgaatatgaacagggtgtagttgttataccggcttatttggccaaaggcatcgaa
ttcgatgcagtcatcatttatgatgcatccatgcaaacatacggtgatgagagcctgcgt
agattgttctacaccgcatgcaccagggctatgcatgacttgcaaatttatacggttggc
gaacccagtcccttcttgaaaaacagtgcagcggagagttcacttctgacctccaactaa
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