Peribacillus frigoritolerans: L8956_21300
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Entry
L8956_21300 CDS
T08180
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L8956_21300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_21300
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
L8956_21300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ULM96316
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Position
complement(4486137..4488041)
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AA seq
634 aa
AA seq
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MNTMTYEKLQYIQLKEMVKNHCVSGLGKALLDRLKPSGTLKVVKSRLNETTEARNLLNAE
SHIPLKGISHIGLHIDKLEKGMILEPSELVAIADFLRGCRNIKKFMTDKEFYAPTLHSYA
RSMTEFRSIEEEIQFTIKGNAVVSEASKDLKRIRNQIIKTESKIEERLNKFLKSGANKEF
IQEFFISKKDDRYTIPIKASYKNQVAGTIVEISAKGATVFIEPASVTKLNVELASLKAEE
SMEEYQLLATLSGTVFEQLKPIKINIELISQYDMIFAKAKFSKSMDAIEPKINDHGYIKL
TGCKHPLLPQDSVPLDFEIGKDYRSLIITGPNAGGKTVVLKTIGILTLAVMSGLHVAGKE
GTELAVFDQVFVDIGDNQSMENALSTFSSHMKNISEIMGAITNNSLLLFDEIGSGTEPNE
GAALAISILEEFYQRGCITVATTHYGEIKRYSEIHSDFMNAAMQFNSETLEPKYKLLIGQ
SGESNALWIAKKMNVREKVLQKAKLYIGNKDYDLERVQESKIKKAKPAAVPKESSYEYEV
GDKVKVSELNGYAIVYKKKDSFNNVVVLFEDTFKEVHANKLELEIKAVDLYPEGYDLDSL
FVSYKERKLNHDLERGSKKALKNVAADIRKKLGE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatgacttatgaaaaattacaatatatccaactcaaggaaatggtcaaaaac
cattgcgtaagcggtttaggaaaagcgttattggatcggcttaagccgagcggcaccttg
aaggtcgttaaaagtcgtttgaacgagaccaccgaggcaaggaacttactgaatgcggaa
agccatattcccttaaagggcatttcacatattggcctccatatcgacaaactggaaaaa
ggaatgattttggagccgtcggagttagtggcgatagcagacttcttaagaggctgcagg
aatatcaagaaattcatgaccgataaagagttctatgcaccgacactgcattcctacgcc
cgctccatgactgaattcaggagcattgaagaagaaatccaattcaccataaagggaaat
gctgtcgtttccgaagcaagcaaggacctgaaacggatcaggaaccaaatcatcaagaca
gaaagtaaaatagaggaacggctgaataagttcttgaagagcggagccaataaagagttc
attcaggaatttttcatcagtaaaaaggatgatcgctacaccatccctatcaaagcctcc
tataaaaatcaagtggccggaacgatcgtggaaatatcggcaaaaggggctaccgtgttc
attgaacctgcctctgttacgaaattgaatgtagaattggcaagcttaaaggcggaggaa
tcgatggaagagtatcaacttttggccacattatccggaacggttttcgaacagctgaaa
ccgatcaagataaacatcgagttgatcagtcaatatgacatgatcttcgcaaaagccaag
ttcagtaaaagcatggatgccatcgaaccgaaaatcaatgatcacggttatattaaatta
actggctgtaagcatccactattgccgcaagacagcgtacctttggattttgaaatcggt
aaggactatcgaagcttgattatcacaggccctaatgccggggggaaaactgtcgtcctg
aaaacgatcggcatccttacattggctgtcatgtcaggactgcatgttgccgggaaagag
gggacggagcttgccgtctttgaccaggtattcgtcgatatcggtgataatcaaagcatg
gaaaatgcactgagcacgttttcatcgcatatgaaaaacatctcggaaatcatgggggca
ataaccaataactccttgctgctgttcgatgaaatcgggagcggaacggaaccgaatgaa
ggagccgcattggcgattagcatacttgaggaattttatcaaagggggtgcataaccgtt
gcgacgacccattatggtgaaattaagcgctactcggaaatacacagtgatttcatgaat
gcggccatgcaattcaacagtgaaacacttgagccaaaatacaagctgttgatcggtcaa
tccggcgaaagcaatgccctttggatagccaaaaaaatgaatgtccgtgaaaaggtactg
caaaaggcaaaactctatatcggaaataaagactacgatttggagcgtgtccaggaaagt
aaaatcaaaaaagcgaagccagcggccgttcctaaagaatcatcttatgaatatgaagtc
ggcgacaaagtgaaggtaagcgaactgaatggatacgcgatcgtttataagaaaaaggac
tccttcaataatgtcgtcgtacttttcgaagataccttcaaggaagttcatgccaataag
ctcgaacttgaaataaaggccgtcgatttatatcctgaaggctatgatctcgattcttta
tttgtcagctacaaagaaaggaaattgaaccatgacttagagcggggatcgaaaaaggcg
ctaaagaacgtagcagcggatattcggaagaagcttggtgaataa
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