Peribacillus frigoritolerans: L8956_24985
Help
Entry
L8956_24985 CDS
T08180
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri02020
Two-component system
pfri02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L8956_24985 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L8956_24985 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfri03021
]
L8956_24985 (rpoN)
Transcription machinery [BR:
pfri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L8956_24985 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_3
MarR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_11
HTH_Crp_2
HTH_20
HTH_IclR
HTH_24
HTH_Tnp_ISL3
HTH_10
HTH_AraC
HTH_17
HTH_AsnC-type
Fe_dep_repress
HTH_5
HTH_38
HTH_26
LacI
HTH_28
Xre-like-HTH
GerE
TrmB
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ULM99869
LinkDB
All DBs
Position
complement(5221645..5222976)
Genome browser
AA seq
443 aa
AA seq
DB search
MNMKAGLFQQQTLKMAMTQELMQAITLLQYSSQELSAFLENKMVENPLLSIDQPTSSLFQ
PTFDRKKGKRTLKNTYDANYWIEQISEDTVSLEQHIMSQVNHQQFSGEQQKAMLLLIHNL
DENGYLRTQLDDICIPGISPAVLEECLSILQELEPHGIGARNLQECLLLQVKAEGENLLA
ESIIENHFLDFAEKRWKDLSKKIGVTLKEIQEVFDYVQTLNPRPASLFFQEKPSYIVPDV
VVEVRDGMLLVGNYDGNTPNLNVDKGYLNRMKSHKDQGVQRFIQDKWQEYQWISRGIQQR
KETILKVIQCIVEKQPACFHHGLNYLKPMTMKEIADELGIHESTVSRAVKGKYVQTPFGT
IEMRIFFTTSLQSVGLDEDMSGMQAKKSLQAAINGENKQKPLSDQDLAERLKEEHGIILA
RRTVAKYREQLGIPSSSKRKRYD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaagcaggactttttcaacagcaaacattaaagatggcaatgacccaggag
ctcatgcaagctattacattgctgcaatactcctcgcaggagctatcggcttttttagaa
aataaaatggtggagaacccattactgtcaatagatcagccaacatcttctttatttcag
ccaacttttgaccgcaaaaaaggtaaacggactcttaaaaatacgtatgatgccaactat
tggattgaacagatcagtgaagataccgtatcgctggaacagcatatcatgtcccaagtg
aatcaccagcagttttccggtgagcagcaaaaggcaatgcttctattaattcataacctt
gatgaaaacggttacttaaggactcagctggatgatatatgcatcccaggcatatctccg
gccgttttggaagagtgtctctcgattttacaggaactcgaaccgcatggcatcggagcg
aggaatcttcaagagtgccttttgcttcaagtgaaagcagaaggggagaatctgctggca
gaatcgatcatagaaaaccatttcctcgattttgctgaaaagcgctggaaagacctaagt
aagaaaatcggtgttacactgaaggagattcaagaggtctttgattatgtccagacgttg
aacccgcgtccggcatcactcttttttcaggaaaaaccttcttatatagtgccggatgtg
gtcgtggaagttcgggatggcatgctgcttgtcgggaattatgatggtaatacacccaac
cttaatgtggataaagggtatttaaaccgaatgaagagccataaggatcagggagttcag
aggtttatccaggataagtggcaggaataccaatggatctccaggggaatccaacagaga
aaagaaacgatattgaaggttattcagtgcatcgtcgaaaaacagccggcgtgctttcat
catggcctgaactatttgaagccgatgacgatgaaagaaatcgcagacgaacttggcata
catgagtccacagtgagccgggcggttaaggggaagtatgtacagacaccatttggcacg
atagagatgcggatatttttcactacttctttacagtcggtcggccttgatgaggatatg
tcgggcatgcaagcgaaaaagagcctccaggcagccatcaatggggaaaataaacaaaag
ccgctttcggatcaagacttggcagaacggctgaaggaagagcatggaattatcctggca
cgccgaaccgttgccaaataccgggaacaattagggatcccttcttcatctaaacgaaaa
agatatgattga
DBGET
integrated database retrieval system
