Pseudomonas fluorescens SBW25: PFLU_0079
Help
Entry
PFLU_0079 CDS
T00899
Symbol
polA
Name
(GenBank) DNA polymerase I (EC
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03030
DNA replication
pfs03410
Base excision repair
pfs03420
Nucleotide excision repair
pfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLU_0079 (polA)
03410 Base excision repair
PFLU_0079 (polA)
03420 Nucleotide excision repair
PFLU_0079 (polA)
03440 Homologous recombination
PFLU_0079 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfs03032
]
PFLU_0079 (polA)
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_0079 (polA)
Enzymes [BR:
pfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLU_0079 (polA)
DNA replication proteins [BR:
pfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PFLU_0079 (polA)
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PFLU_0079 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLU_0079 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI2794420
UniProt:
C3K6S9
LinkDB
All DBs
Position
1:78153..80942
Genome browser
AA seq
929 aa
AA seq
DB search
MILLMSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFA
VVFDAKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIG
TLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDY
LALMGDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEE
HKEMAFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRV
ELKAAPVVEDVAEVAAPAEATYTTILDQATFDIWLKKLNDAKLFAFDTETTGIDAQQAQL
VGVSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNIL
ANCAIGGDPAHGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDYDTVAFQDIAGKG
AKQLTFDQIALEQAGPYAAEDADVTLRLHQALFAQLSAIPSLASVLTDIEIPLVPVLARI
ERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLK
KTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSY
HQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPKGYKMLAADYSQIELRIMAHLSK
DEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGV
DTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVETFFGRRLYLPDIHSNKPQERAAA
ERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLDAKVILQVHDELVLEVREDLVAEVSEK
IREYMSAAAQLDVPLLVEVGVGDNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgattctgctcatgagccaagcacccctcgtcctggtggacggttcttcctatctgtac
cgcgcgttccatgcgctgccaccgctgaccacctccaaaggcctgcccaccggcgcggtc
aagggggtgttgaacatgctcaaaagcctgcgcaagcagtacccggacagcccgttcgcg
gtggtgttcgacgccaagggtgggacctttcgcgatgacatgtacgccgaatacaaggcc
aaccgcccgagcatgcccgatgacatgcgcctgcagatcgagccgctgcaccagagcgtg
atcgccctgggcttcccgttgttgtgcgtcgaaggcgttgaggccgatgacgtgatcggc
accctggcccgcagcagtgcggccgctgaccgtccggtggtgatctccaccggggacaag
gacatggcacagctggtcgacgggcacattaccttggtcaataccatgaccggtagcgcg
atggacatcgagggcgtgaaggagaaattcggtgtcgctcccgagcagatcatcgactat
ctggccttgatgggcgattcgtccgacaacatcccaggcgtcccgggcattggtccgaag
actgcttccggcttgctggtcggtgtgaatggtggccttaaagagctgtatgaacagctg
gatatcgtgccgaccctgcctattcggggcgcgaagacgctgccggccaagctggaagag
cataaggagatggcgttcctttcctaccagttggcgacgatcaagattgatgtgccgctg
gatgtgggcctggatgacctgcacctgattgagccggaccgtgaaaaactgctggagctg
tacacgctgctggagttcaagagctggtttgatgagatccagcgcgacgccaagcgggtg
gagctcaaggctgcgccggttgttgaggacgtcgctgaggtagcggcgccggcggaggcg
acctacaccacgatccttgatcaggccaccttcgacatctggttgaagaagctcaacgac
gcgaagctgttcgccttcgacaccgaaaccaccgggatcgatgcccagcaggcgcagttg
gtgggtgtttccttcgcggtgcagccccacgaagcggcctatatcccgctcacccacgcc
tacatcggcgcgccggagcagttggatcgcgataccgtgctgctggccctcaaaccgctg
ctggaagacccgaccaagctcaaggtcggccagcacgccaagttcgacatgaacatcctg
gccaattgcgccatcggcggcgacccggcgcacggcattaccgtgcggggcatcgccttc
gacaccatgctcgaatcctatgtgttgaacgccaccgcaacgcggcatgacatggacagc
ctggccaagaagtacctggactacgacaccgtcgccttccaggacattgccggcaagggt
gccaagcagctgactttcgatcagatcgcgctggagcaggctggcccttatgcggcggaa
gacgccgatgtgaccttgcgtctgcaccaggcgctgtttgcgcaactttcagccattccg
agcctggcgagtgtgctcacggatatcgagattccgttggtgccggtgttggcgcgtatt
gagcgccagggtgcgctggtcgacaaggacctgctgggtatccagagcatcgaactgggc
aacaagatggtcgagctggagcgccaggcgttcgagatcgccggtgaagaattcaacctg
ggttcgcccaagcaactcggggcgattctgtacgaaaaactcggcctgccggtactgaag
aaaaccggcaaaggccaggcttcaaccgccgaagaagtgctggcaaagctggccgaagat
gactacccgctgcccaaggtgctgatgcagtaccgcagcatgagcaagctgaaaagcacc
tacaccgaccgtctgccggaacagatcaacccgcgcaccgggcgtatccacacgtcctat
caccaggcggtggcggcgaccgggcgtttatcgtccagcgatccgaacctgcagaatatc
ccggtgcgtaccgctgaagggcggcggattcgccaggccttcatcgcgcccaaaggctac
aaaatgctggcggcggactattcgcaaattgagctgcggatcatggctcacctgtcgaag
gacgaaggtttgatgaacgccttccgtcacaacctcgacgtgcacacggccacggcggcc
gaggtgttcaaggttgagctgggtgacgtcacgtctgatcaacgccgcagcgccaaggcg
atcaactttggtttgatctatggcatgggcgcacagaagctgggcaaggatattggcgtc
gataccaagacggccaaggcgtacatcgatgtgtatttcgcccgttatcccggggttcgt
gagtacatggaacgcacccgcgcccaggcgtccgatcagggctacgtagagaccttcttc
ggtcgccgcctctacttgccggatatccattccaacaagccccaggagcgcgcggcggct
gaacgcactgccatcaacgcgcccatgcagggcacagcggcagacatcatcaagaaagcc
atggtgctggtggataactggctgacggattcaggcctggatgccaaggtgatcctgcag
gtgcacgatgaattggtgctggaagtgcgtgaggatctggtcgcggaagtcagcgagaag
attcgcgagtacatgagtgccgctgctcagctggatgtgccgctgctggtggaagtgggc
gtcggcgataactgggaccaggcgcactga
DBGET
integrated database retrieval system
