Pseudomonas fluorescens SBW25: PFLU_0481
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Entry
PFLU_0481 CDS
T00899
Symbol
msbA
Name
(GenBank) ATP-dependent lipid A-core flippase (EC (Lipid A export ATP-binding/permease protein MsbA)
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFLU_0481 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfs02000
]
PFLU_0481 (msbA)
Enzymes [BR:
pfs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PFLU_0481 (msbA)
Transporters [BR:
pfs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PFLU_0481 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
DEAD
NB-ARC
AAA_30
nSTAND3
HUTI_composite_bact
RsgA_GTPase
nSTAND1
DUF815
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CAI2794800
UniProt:
C3KDB7
LinkDB
All DBs
Position
1:545288..547093
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AA seq
601 aa
AA seq
DB search
MTDSSPSASPSSLKIYFRLLSYVKPYAGLFALSIVGFLIFASTQPMLGYILKYFVDGLSN
PEAVLFPSVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFN
NLLTLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLYMNWR
LTLVMIAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYE
EKRFLKASQSNTDKQLRMTRTGAIYTPALQLVIYTAMAVLMFLVLYLRGDASAGDMVAYI
TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEDVEIDNGTVERDKVSGRLDVRNLN
FTYPGTERHVLKDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHASGEILLDGVEIE
DYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLAGAPRADVEAAAADANAKDFIDQLPK
GFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQ
GRTTLVIAHRLSTIEKADLILVMDDGRIVERGTHSELLAQNGYYARLHAMGLDAPVSADI
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactccagtccgagcgcaagcccttcgagcttgaaaatatacttccgcctgctc
agttacgttaagccttatgccggcttgttcgcattgagtatcgtcggatttctgattttc
gcgtcgacccagccaatgctggggtacatcctcaagtacttcgtcgacggcctttccaac
cctgaagccgtgctgttccccagcgtgccattcctgcgcgacctgcaattgctgcaagcc
gtgccgctgctgatcatcctgattgccgcctggcaaggcctcggttcgttcctgggcaac
tacctgttggccaaggtttccctgggcctggtccatgacttgcgcgtgcagttgttcaac
aacttgctgacgctgcccaaccgctactttgacaatcacaactccgggcacctgatttca
cgcatcaccttcaacgtgaccatggtcacgggggcggcgaccgatgcgatcaaggtggtg
atccgtgaaggcatgacggtgatcttcctgtttgcctcgctgctgtacatgaactggcgc
ctgacgctggtgatgatcgccatcctgccgttgatcgcggtgatggtgagcacggccagc
aagaaattccgcaagcagagcaagaagatccaggtggccatgggcgacgtcacgcacgtc
gcctcggaaaccatccagggctaccgcgtggtgcgcagcttcgggggtgaggtctacgag
gaaaaacgcttcctcaaggccagccagagcaacaccgacaagcaactgcgcatgacccgc
accggggcgatctacacgccggcgctgcaactggtgatctacaccgccatggcggtgctg
atgttcctggtcctttatctgcgtggcgatgcttcggccggtgacatggtggcctacatc
accctggccggcctgctgcccaagccgattcgccagctctcggaagtcagctcgaccatc
caaaagggtgtggcgggtgctgaaagcatcttcgaacagctggacgaagacgttgaaatc
gacaacggcaccgtcgagcgtgacaaggtcagcggtcgtcttgatgtgcgcaacctgaac
ttcacctaccccggcaccgaacgccatgtgctcaaggacatcagctttaccgccgagcct
gggcagatgatcgcgctggtcgggcgctcgggcagcggtaaatcgaccctggccagcctg
atcccgcgtttctaccaccatgccagcggtgaaatcctgctggacggcgtcgagatcgaa
gactacaagctgctcaacctgcgcaagcacatcgcccaggtgacccagcacgtgacgctg
ttcagcgacacggtgaccaacaacatcgcctacggcgacctggccggcgcgccacgggcg
gacgttgaagcggcagcggcggatgccaatgccaaggacttcatcgaccaactgcccaag
ggcttcgacacccaggttggcgaaaacggcgtattgctgtccggtggccaacgccagcgc
ctggcgattgcccgtgccttgctgaagaacgcgccgttgctgattctcgacgaggccacc
tcggccctcgacaccgagtccgagcggcacattcaggcggcgctggacaaggtcatgcaa
ggccgcaccaccctggtgatcgcgcaccgtttgtccaccatcgagaaggccgacctgatc
ctggtgatggacgacggccggatcgtcgagcgtggcacccacagcgagctgctggcgcag
aacggctactacgcccgcctgcacgccatgggcctggatgcgccggtgtcggctgacatc
acctga
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