Pseudomonas fluorescens SBW25: PFLU_0879
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Entry
PFLU_0879 CDS
T00899
Name
(GenBank) Nucleotide-binding protein PFLU_0879
KO
K06958
RNase adapter protein RapZ
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfs03019
]
PFLU_0879
Messenger RNA biogenesis [BR:
pfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFLU_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
CoaE
AAA_22
AAA_29
RsgA_GTPase
AAA_16
FtsK_SpoIIIE
T2SSE
ABC_tran
SKI
Motif
Other DBs
NCBI-ProteinID:
CAI2795186
UniProt:
A0AA35MXX3
LinkDB
All DBs
Position
1:complement(989765..990622)
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AA seq
285 aa
AA seq
DB search
MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLERFPQLLEEVRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSPHRSLAEA
IEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDQSGLDQPVADYLAAQPDVEEMFQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQVLQKTLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgatcatcgtcagcggccgctccggctcgggtaaaagtaccgccctcaatgtt
cttgaggacaacggtttctattgcatcgacaacctgcccgccggcctgctgccggaattg
gcagaacgcgcgttgatccacaccgaactggctcaacccctggtcgccgtttcgattgat
gcccgcaacctgcccagccacctggagcgatttccgcaattgctcgaggaagtgcgggcc
aagcacattcattgcgatgtgctgtacctggatgccgacgaagagacactgctcaagcgt
ttctccgaaacccgccggcgtcaccccctcagcagccctcatcgctcgctggcagaagcc
atcgaagatgaaaccaagctgctgggaccgatcattgacctcgccgacctcaagatcaac
acgaccagccttaacctgtaccaactgcgcgatgccatcaagctgcgcctgctgaaccag
ccggagccaggcacggcgtttctggtggagtcgtttggttttaagcgcggcatgccggtg
gacgccgacttggtattcgatgtgcgatgcctgcccaacccttattggaagccggaactg
cgtgatcagtccggactggatcagcccgtcgccgattacctggctgcacaaccggatgtg
gaggagatgttccaggacatttccagctacttgctcaaatggttaccccgatttgctgcc
agcaatcgggcctatgtcaccattgccatcggctgcaccggcggtcaccaccgctccgtc
tatctgaccgagcgcctgggccaggtgctgcaaaaaaccctcaagaacgtccaggtccgc
caccgcgacctcagctga
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