Pseudomonas fluorescens SBW25: PFLU_1042
Help
Entry
PFLU_1042 CDS
T00899
Symbol
fecI
Name
(GenBank) Probable RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLU_1042 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfs03021
]
PFLU_1042 (fecI)
Transcription machinery [BR:
pfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLU_1042 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_20
HTH_23
HTH_24
GerE
HTH_28
Xre-like-HTH
Trp_repressor
TnsD
HTH_10
CHASE3
HTH_11
HTH_5
HTH_38
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CAI2795346
LinkDB
All DBs
Position
1:complement(1154364..1154861)
Genome browser
AA seq
165 aa
AA seq
DB search
MSPLSPSNTVEVLYNDHHRWLTGWLRRKLGCPESAADLAQDTFIRVLTARETPPLIEPRA
FLTTVAKRVLFNFYRRQDLERAYLDALAHMPEHVAPSEEERAIILQTLVELDQLLDGLPV
QVKRAFLLAQLDGLTYAQIGAELGISIATVKRHLNKAAMRCYFAL
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgttgagcccgtccaacaccgtcgaagttttgtacaacgaccaccaccgctgg
ctcaccggctggttgcgacgcaagctcggctgcccggaaagtgccgccgacctggcacag
gacaccttcattcgcgtactcaccgcacgggaaacgcccccgttgatcgagccccgtgcg
tttctcaccaccgtcgccaagcgcgtgctgttcaacttctaccgccgccaggacctggaa
cgcgcctacctcgacgccttggcgcacatgcccgagcacgtcgcgccgtcggaagaagaa
cgcgcaatcatcctgcaaaccctggtggagctggatcagctgctcgacggcctgcccgtg
caggtcaaacgcgctttcctgctggcccagctggatggcctgacctacgcacaaatcggc
gctgaactgggcatctccatcgccaccgtcaaacgccacctgaacaaagcggccatgcgc
tgctatttcgccctatga
DBGET
integrated database retrieval system
