Pseudomonas fluorescens SBW25: PFLU_1060
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Entry
PFLU_1060 CDS
T00899
Symbol
rnc
Name
(GenBank) Ribonuclease 3 (EC (Ribonuclease III) (RNase III)
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfs03019
]
PFLU_1060 (rnc)
03009 Ribosome biogenesis [BR:
pfs03009
]
PFLU_1060 (rnc)
03036 Chromosome and associated proteins [BR:
pfs03036
]
PFLU_1060 (rnc)
Enzymes [BR:
pfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PFLU_1060 (rnc)
Messenger RNA biogenesis [BR:
pfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFLU_1060 (rnc)
Ribosome biogenesis [BR:
pfs03009
]
Eukaryotic type
90S particles
RNase
PFLU_1060 (rnc)
Prokaryotic type
rRNA processing factors
PFLU_1060 (rnc)
Chromosome and associated proteins [BR:
pfs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PFLU_1060 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
CAI2795364
UniProt:
A0AA35MXH5
LinkDB
All DBs
Position
1:1173470..1174159
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AA seq
229 aa
AA seq
DB search
MTVSLARLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAAKERVTAWLTSEIESLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtttctctagcacgtctcgagcgccagctcggctacaccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagctttgcagggcgcaacaacgagcgcctggaa
ttcctcggtgatgccatcctcaatttcgtcgccggtgaagcgctgttcgagcgcttcccc
caagcccgtgaaggccagctgtcgcgcctgcgcgcacgcctggtgaagggcgagaccctt
gccgtgctggcccgtggctttggcctgggcgaatacctgcggctgggttccggtgagttg
aagagcggcggtttccggcgtgaatcgatcctggccgatgccctcgaggcgttgatcggt
gcgatctacctcgatgcaggcatggaagcggccaaggagcgcgtcactgcgtggctgact
tccgagatcgagagtctcactctggtcgacaccaacaaagatcccaagacccgcctgcag
gaattcctgcagtcccgcggttgcgaactgccacgctacgaagtggtggatatccagggt
gagccccattgccgcgtattcttcgtggaatgtgaaatcaccttactgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga
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