Pseudomonas fluorescens SBW25: PFLU_1441
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Entry
PFLU_1441 CDS
T00899
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase (UDG) (EC
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLU_1441 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_1441 (ung)
Enzymes [BR:
pfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PFLU_1441 (ung)
DNA repair and recombination proteins [BR:
pfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLU_1441 (ung)
Prokaryotic type
PFLU_1441 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAI2795733
UniProt:
A0AA35HX80
LinkDB
All DBs
Position
1:1582963..1583655
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AA seq
230 aa
AA seq
DB search
MTEDDRIKLEPSWKHALRDQFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPINWVLPPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacgaccgtatcaaactcgaacccagctggaaacacgccctgcgggatcag
ttcgagcagccgtacatggcgcagttgcgcgagttcctgcgccaggaacatgccgccggc
aaagagatctacccgcccggcccgttgattttcaacgcgctcaattccacgccgctggac
aaggtcaaagtcgtgatcctcggccaggacccgtaccacggccccggccaggcccacggc
ctgtgcttctcggtgcaaccgggcgtgccggcgccgccgtcactggtcaatatctataaa
gagctcaagcgcgacctgaacattgacatccccaatcacggctacctgcaaagctgggcg
gaccagggcgtgctgatgctcaacaccaccatgaccgtcgagcgcgccaacgccaacgcc
catgcgggcaagggctggcagttctttaccgatcggattatcgaagtggtcagcgagcat
caaccgcacctggtgtttttgctgtggggcgcccatgcccagggcaagcagaagctgatc
gatgccaccaagcacctggtgttgacctcggtgcacccgtcgccgctgtcggcatatcgc
gggttcctggggtgcgggcatttcagtcgcaccaacaagtttcttgagcagaatggcgag
acgccgatcaactgggtgttgccacctgcctga
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