Pseudomonas fluorescens SBW25: PFLU_1553
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Entry
PFLU_1553 CDS
T00899
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC (EC (EC; 3-hydroxyacyl-CoA dehydrogenase (EC ]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00071
Fatty acid degradation
pfs00280
Valine, leucine and isoleucine degradation
pfs00310
Lysine degradation
pfs00362
Benzoate degradation
pfs00380
Tryptophan metabolism
pfs00410
beta-Alanine metabolism
pfs00640
Propanoate metabolism
pfs00650
Butanoate metabolism
pfs00907
Pinene, camphor and geraniol degradation
pfs00930
Caprolactam degradation
pfs01100
Metabolic pathways
pfs01110
Biosynthesis of secondary metabolites
pfs01120
Microbial metabolism in diverse environments
pfs01200
Carbon metabolism
pfs01212
Fatty acid metabolism
Module
pfs_M00087
beta-Oxidation
pfs_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PFLU_1553 (fadB)
00650 Butanoate metabolism
PFLU_1553 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PFLU_1553 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFLU_1553 (fadB)
00310 Lysine degradation
PFLU_1553 (fadB)
00380 Tryptophan metabolism
PFLU_1553 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PFLU_1553 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFLU_1553 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFLU_1553 (fadB)
00930 Caprolactam degradation
PFLU_1553 (fadB)
Enzymes [BR:
pfs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PFLU_1553 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PFLU_1553 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PFLU_1553 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PFLU_1553 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAI2795839
UniProt:
A0AA35HX16
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All DBs
Position
1:1700943..1703090
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggctgatgcatcgatcaaaggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtaccgaccgtcgccgcgatcaacggcatcgcgttgggcggcggcctggaa
atgtgcctggcggcagacttccgcgtcatgtcggccacggccaagatcggcctgcctgaa
gtcaagttgggcatctacccagggtttggcggcaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggtgccgtcgatgctgtggttgccccggacaaactcgccgaagccgcactgaac
ctgatcaaaggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccgggccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaagtggaagcggcaggtttcgtcaaa
ctggcgaaaacctcggcggcccagagcttgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgagatcgcccgcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaagggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaaggcctggcagaagccgccaagctg
ctggtgggtcgtgtggataaaggtcgcatgaccgcagcgaagatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggtgatttcgggcatgtcgacctggtggtcgaagcc
gtagtcgagaacccgaaggtcaagcaggccgtgctggccgaagtcgaagcccaggtcaaa
gacgacactatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggtatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtgatccgtggcgagaagtccagcgagctggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgttcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctatgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtccgacgaagacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgagaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattcgatcggtgtg
gctgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaatggccagagcttcttcggttaa
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