Pseudomonas fluorescens SBW25: PFLU_1643
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Entry
PFLU_1643 CDS
T00899
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A (EC
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfs03032
]
PFLU_1643 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_1643 (gyrA)
Enzymes [BR:
pfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PFLU_1643 (gyrA)
DNA replication proteins [BR:
pfs03032
]
Prokaryotic type
DNA Topoisomerases
PFLU_1643 (gyrA)
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFLU_1643 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAI2795927
UniProt:
C3K6J4
LinkDB
All DBs
Position
1:1801923..1804577
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AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEALEGEEFEGEVIAAGDDNVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgctgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggccgtcatgcca
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggccacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcaatacatccccggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgcggccgcatt
tacatgcgcgcccgctcgatgatcgaagacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgagctcccttaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaagctggaaggcatcaccgagctgcgcgacgagtccgacaaagac
ggtatgcgcgtcgtgatcgagctgcgccgtggcgaagtgcctgaggtgatcctcaacaac
ctctatgcccagacccagctgcaaagcgtgtttggtatcaacgtggttgcactgatcgat
ggccgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgtcgc
gaagtcgttacccgccgtaccgtgttcgaactgcgcaaggcccgcgagcgcggccacatc
ctggaaggccaggcggttgcgctgtcgaacatcgacccggtgatcgccctgatcaaggct
tcgccgaccccgtcggaagctaaagaagccctgatcaagatgccgtgggagtccagcgcc
gtggtggcgatggttgaacgtgccggcgccgactcgtgccgtccggagaccctggacccg
caatacggcctgcgtgacggcaagtacttcctgtcgccggaacaggcccaggccatcctg
gaactgcgcctgcaccgcttgaccggcctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagttgatccgcatcctcagcagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagatcctcgacgcgcgcctcgacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggtggctatgccaagacccagccgttggcggcgtaccaggcc
cagcgccgtggcggtaaaggtaaatcggctaccggcgtcaaggatgaggactacatcgct
cacctgctggtcgccaacagtcacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaatcccggaagcgtcgcgtgccgcccgtggtcgtccgctg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggcgaccgccaaaggcaccgtgaagaagaccccg
ctggaatccttcagccgtcaacgcagcgtgggcctgatcgccttggagctggacgaaggc
gacgtactgatctccgccgccatcaccgatggcgagcgtgaagtcatgctgttctccgac
ggtggcaaggtgacgcgcttcaaggaatccgacgttcgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgcggttatggcaagcgtacggccatcagc
gagttcccggagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgaccgc
aacggccgtctggtcggcgcggtccaggtgctcgacggcgaggaaatcatgctgatttcc
gaccagggcaccctggtgcgtacccgtgtggctgaagtgtcgagcctgggccgtaacacc
cagggcgtgaccttgatcaagctggccaaggacgaaaaactggtcggcctggagcgtgtc
caggagccgtcggaagtcgaaggcgaagcgctggaaggcgaggaatttgaaggcgaggtg
atcgcagcaggcgatgacaacgtcgacgagccaaccctcgatgctgccgcagacgaagaa
gaaccgcaggaataa
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