Pseudomonas fluorescens SBW25: PFLU_2153
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Entry
PFLU_2153 CDS
T00899
Name
(GenBank) Putative LysR-family regulatory protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfs03000
]
PFLU_2153
Transcription factors [BR:
pfs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFLU_2153
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
MarR_2
DExH14_plug
Motif
Other DBs
NCBI-ProteinID:
CAI2796413
UniProt:
C3K786
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Position
1:2332893..2333792
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AA seq
299 aa
AA seq
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MTVKQMRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARYPQV
NVTVHDLINEQVLEMVRDRQVELGVAFEPSEGSSLAFTPLYLDRFIAVVPGDSPLAGCAE
IDWKTLLEQPFITLQRPSTVRVMLEEHLGALKMKLPVALESHQLATVGKMVASGLGVSAV
PALCARQMEEAGAHCITLTDPVIERPIGVLTKPGHELSAAAQALFDIFQDEAAKGRFPL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaaacagatgcgcgcgtttctcgccgtggcccagagcctgagttttgctgcc
gcctgcgagcgcctgcacctttcccagtcggcgctgagcctgaccatcaagggccttgaa
gaaggcctgggtgggcgcctgttcagccgcaatacgcgcaatgtagcgctgacacccgaa
ggcgaatccctgcttccgctggcacgccggctgattgccgattgggacaacgccgaggat
gagctgcgccaacggttcacgctgcagcgtgggcgagtcacggtcgcggcgatgccgtcg
tttgcgggcaacttgttaccgccgatcctgaagatattccgcgcacgttacccgcaggtg
aacgtgacggtgcatgacttgatcaacgagcaggtgctggagatggtgcgtgaccgccag
gtggagttgggcgtggcgttcgagccgtcagaagggtcgtcgctggcgttcacgccgttg
tacctggaccgcttcatcgctgtggtgcccggtgattcgccgttggcggggtgtgccgaa
atcgattggaagaccttgctggagcagccgttcatcaccttgcaacggccgtccacggta
cgggtgatgctggaagaacacttgggcgctctaaagatgaagctgccggtcgcactggaa
agccatcaattggcgacggtgggcaagatggttgccagcgggcttggcgtcagcgcggta
cccgcgttgtgcgcacggcagatggaagaggcgggtgctcattgcatcactttgaccgac
ccggtgatcgagcgaccgattggggtattgaccaagccggggcatgagctgtcagcggcg
gcgcaggcgttgtttgatatttttcaggatgaggccgcgaaaggccggtttccgctctga
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