Pseudomonas fluorescens SBW25: PFLU_2268
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Entry
PFLU_2268 CDS
T00899
Name
(GenBank) Rhamnogalacturonan endolyase (EC
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFLU_2268
Enzymes [BR:
pfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PFLU_2268
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
CarbopepD_reg_2
Ig_DR_A0283-like
Motif
Other DBs
NCBI-ProteinID:
CAI2796520
UniProt:
C3KAQ7
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All DBs
Position
1:complement(2461999..2463582)
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AA seq
527 aa
AA seq
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MRRFLLMVFCTLAAQAHAASFGFTRTDARIDVDTGTDLLFSVDTRNGDLVSMRYRDSELQ
TTEPKASQLASGLGSAQVDARTVADVIVISARAGNVIHYYLAKKGRAAIYMATYAPTLLP
VGKLRFVARLNVSKLPKADRGTDSNVGTAVEGKDVFLLPDGRTSSKFYSAHAMIDDPLHA
VKGPGVAVYMLMGNRELSAGGPFFKDIATQKTPITHELYNYMFSNHTQTEAYRGGLHGVY
GLLFTDGGAPSDTVKDLSFVNDNLGLAGFLGSTGRGALAGQVSGVASALPAVIGLSNAGA
EYWARADDSGRFQLTGIRPGKYRVTLYQNELEVAQRSVDINAGATTQTRLQAQPSTGQVK
WQIGTPDGTPAGFLNAHLLASAHPSDSRMAPWKPVTYTLGTSRPNEFPAAQWRDINTPTR
ITFMLAAHQVRDARLRLFISLAQAGGRPQVSVNQRWQAPVPPASNQPDSRGITRGTYRGN
NVVFEVSIPASALQVGANTLEIGVASGNTGKGFLSPGFVFDSVQWVQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgattcctgctgatggtgttttgtacgcttgcggcccaggcacacgccgccagc
ttcggcttcacgcgcaccgacgcccgaatcgacgtcgacaccggtacagacctgctgttc
agcgtggacacgcgcaatggcgacctggtctccatgcggtaccgcgacagtgaattgcag
accaccgagcccaaagcctcgcagcttgcatccggcctgggcagcgcgcaagtagacgcg
cgcacggtagcggacgtgattgtcatcagtgctcgcgcgggcaatgtgatccactactac
ctggcgaaaaaaggacgcgcagccatttacatggcgacctacgcgccaaccctgctaccg
gtgggcaagctgcgctttgttgcgcgactcaacgtcagcaagctgcccaaggccgatcgc
ggcaccgactccaacgtcggcacggcggtcgaaggcaaggatgtgtttctgctgcccgac
gggcgcaccagctccaagttctattcggcacacgcgatgatcgacgaccccctgcacgcg
gtcaaaggcccgggcgtggcggtctacatgttgatgggcaaccgtgagctcagtgctgga
gggccgtttttcaaagatatcgccacccagaaaacgccgatcacccacgagctgtacaac
tacatgttctccaatcacacccagaccgaagcctatcgcggcggcttgcacggggtgtac
gggctgttgtttaccgacggtggcgcgccctccgacaccgtgaaagacctgagcttcgtc
aacgataacctcggccttgccggcttcctgggcagcacaggacgaggtgcgctggccggt
caggtttcgggcgtggccagtgcattgccggcggtaatcggcttgagcaatgccggcgcc
gaatattgggcccgtgccgacgacagcggccggttccagttgacggggatacgtccagga
aagtaccgggtaacgctctatcagaatgagttggaggtggcgcagcgcagcgttgatatc
aacgcgggtgccaccacgcagacgcgcctgcaggcgcaaccgtcgacaggccaagtgaaa
tggcaaatcggcacacctgatggcactccggcagggtttcttaacgcgcacctgctcgcc
tccgctcatcccagcgactcacgcatggcaccgtggaagccggtcacctacaccctcggc
accagccgccccaacgagtttcccgccgcacaatggcgtgacatcaacacccccacgcgc
atcaccttcatgctggccgcccaccaagtgcgcgacgctcgcctgcgcctgttcatttcc
ctggctcaagctggtgggcgcccgcaggtgagcgtcaatcagcgctggcaggcgcccgtg
ccaccggcgtcgaaccagccggacagccggggcatcacccgtgggacttatcggggtaat
aacgtggtgtttgaggtcagcatccccgccagcgcgttgcaggttggcgcgaacacactg
gagatcggtgttgcatcgggcaacaccggtaaaggctttctgagcccgggttttgtgttc
gatagcgtgcagtgggtacagtaa
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