Pseudomonas fluorescens SBW25: PFLU_3369
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Entry
PFLU_3369 CDS
T00899
Name
(GenBank) Putative glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00500
Starch and sucrose metabolism
pfs01100
Metabolic pathways
pfs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PFLU_3369
Enzymes [BR:
pfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PFLU_3369
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
CAI2797581
UniProt:
C3KD21
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All DBs
Position
1:3729086..3731245
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AA seq
719 aa
AA seq
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MSKPDKTPPTPDNEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDDSGEVEL
ERIELPEYTDETFHGYLPDAHPGLIYGYRVYGAYDPANGHRFNHNKLLIDPYAKQLVGEL
KWSEALFGYTIGHPDDDLSFDERDSAPFVPKCKVIDPAHTWGNDQPVRVPWDRTIIYETH
LRGISMRHPSVGESVRGTCAGLMEDDVLKHIRQLGISSVELLPVHAFVNDQHLLEKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAKLEVILDVVYNHTAEGNERGPTLSM
RGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYRDGFDERHSFLVACRQDPVLRQLKMIAEPWDCGPGGYQVGNFPPGWVEWNDRF
RDTVRAFWKGDDSQLADFAARMTASGEMFNHRGRRPYSSVNFITAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINALRLRQMRNFFATLLLSQGTPMLVAGD
EFARTQHGNNNAYCQDSEIGWINWDLDEDGKALLKFVKRLIKLRLAYPILRRGRFLVGDY
NEDIGVKDVTWLAPDGNEMTTEQWQDSNGRCLGMLMDGRAQETGIRRPGADATLLLVVNA
HHDMVNFRLPSVPQGEFWTCMLDTNEPAVRGQERFDFDHEYAVTGRSLLLFELQRDDEV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccgacaaaaccccaccgacgccggacaacgagccgtcgcggatccgtgaa
ggtttgcccttcccgcttggcgcgacctgggatggcctgggcgtcaactttgcgctgttt
tcagccaacgccaccaaagtggagttgtgcctgttcgatgattccggcgaagtcgagctg
gaacgcatcgaactaccggaatacaccgacgaaaccttccacggctatctgcccgacgcc
caccctgggctgatttacggctaccgcgtgtacggtgcgtatgacccggccaacggccac
cgtttcaaccacaacaaattgctgatcgacccctatgccaaacagctggtgggcgaactc
aaatggtccgaggcgctgttcggctacaccatcggccacccggatgacgacctgagcttc
gacgaacgcgacagcgcgcccttcgtgcctaagtgcaaggtgatcgacccggcccacacc
tggggcaacgatcagccggtacgggtgccgtgggaccgtacgatcatctacgaaacccac
ctgcgcggcatcagtatgcgtcacccttccgtcggcgagtccgtgcgcggcacctgcgcc
gggctgatggaagatgacgtgctcaagcacatccgccagctgggtatttcgtcggtagaa
ctgctgccggtgcacgcctttgtcaacgaccagcacctgctggaaaaaggcatgaccaac
tactggggttacaacagcatcgcgttttttgcccccgacccacgctacctggccagcggc
aagattgctgagttcaaggagatggtcgcgcacctgcacgaagccaagctcgaagtgatc
ctggacgtggtctacaaccacaccgccgagggcaacgagcgcggtccgaccctgtcgatg
cgcggtatcgacaacgcttcgtactaccgcctgatgccggatgacaagcgtttctacatc
aatgattccggtaccggtaacaccctggacctgagccacccgtgcgtattgcaaatggtc
accgactcgctgcgttactgggcgaccgagatgcacgtcgacggtttccgcttcgacctg
gcgaccatccttggccgctaccgcgatgggtttgacgagcgccacagtttcctcgtggcc
tgccgccaggacccggtactgcgtcagttgaagatgatcgccgagccctgggactgtggc
cccggcggataccaagtgggcaacttcccgccgggctgggtggaatggaacgaccgtttc
cgcgacaccgtgcgtgcattctggaaaggcgacgacagccagttggccgactttgccgcc
cgcatgaccgcttccggcgagatgttcaaccaccgtgggcgccgcccttacagctcggtg
aacttcatcaccgcccatgacgggttcaccctgcacgacctcgtgtcgtacaacgacaag
cacaacgaagccaacgacgagaacaaccaggacggtagcaacaacaacctgtcgtggaac
cacggtgtcgaaggcccgacagacgacccggaaatcaacgcgctgcgcctgcgtcagatg
cgtaacttcttcgccacgctgctgctgtcccaaggcacgccgatgctggtggccggtgac
gaatttgcgcgtactcagcacggcaataacaacgcctactgccaggacagcgagatcggt
tggataaactgggacttggacgaagacggcaaggcgctgctcaagttcgtcaagcgcctg
atcaagctgcgcctggcctacccgatcctgcgtcgcgggcgcttcctggtgggcgactac
aacgaagacatcggcgtgaaggacgtcacctggctggcgccggatggcaacgagatgacc
accgaacagtggcaagacagtaacggtcgctgcctgggcatgctgatggatggccgcgcc
caagagaccggcattcgccgccctggcgccgatgccaccttgttgctggtggtcaacgcg
caccacgacatggtcaatttccgcctgccgtcggtgccccaaggtgaattctggacctgc
atgctcgacaccaacgagccggccgtgcgcggccaggaacgctttgattttgatcacgag
tacgcggtgaccggccgctcgctgctgctgttcgaactgcagcgtgacgacgaggtgtga
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