Pseudomonas fluorescens SBW25: PFLU_3512
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Entry
PFLU_3512 CDS
T00899
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_3512
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLU_3512
Archaeal homologous recombinant proteins
PFLU_3512
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CAI2797720
UniProt:
C3KDI1
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All DBs
Position
1:3888194..3889435
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNAHSPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGELDA
ERLLIPLPDAKGKVAAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVSVEPLLIPRSVDLQRLEAAPLADILKAL
AELPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGKRGSD
DTCEERLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccatggccaggaacgc
gacttcgaacacgcctgtttcctcgagtggctgctgggccaactcaacgcccatagcccg
gatgtactgctcatcgccggcgatattttcgacacggtcaacccaccgctcaaggcgcag
gagcggctgtatgacttcatcatcagcgcccatgaacaaaacccgaagctgaccatcgtg
atgatcgccggcaaccacgactccggctcgcgtatcgaactgcccgcgccgctgatgcgc
cgtctgcgcacccacgccctcggccgggtgttgtggctggatgatggcgaactcgacgcc
gagcgcctgcttatcccgctgccggatgccaaaggcaaggtcgccgcgtggtgcctggcg
ctgccgttcctgcggccggcggaagtcaccggcgcgcacctgggtgacgattacctgcgc
ggtatcggccaggtccatgaatggctgatcgccgccgccaacgccaaacgcaaaaaaggc
caggcgctgattgccatcagccatgcgcacatggccggtggttcggtgtcggaagactcc
gaacgcagcctgatcatcggcaatgccgaggcgctgccggccagtctgttcgatagaagc
gtcgcgtacgtcgccctcggccacttgcacaagccgcaaaaggtcaatggcgaagaacgc
attcgctacagcggttcgccgattccgctgtcgttttccgaaatcggctacaagcatcag
atccttgacgtgacgttccagggccaatgcctggtgagtgtcgaaccgctgctgatcccc
cgctcggtcgacctgcaacgcctggaagccgcgcccctggccgacatcctcaaggcgttg
gccgagttgccggacgtcgacctgctcgccgagacccagcgccacccctggctcgaagtc
cgtgtgcgtctcgacgagccgcagcccgacctgcgccagcagattgaaactgcgctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggcaagcgcggcagcgac
gacacctgtgaggagcgcctgatcgaactcgaccagctcacgccccaggaattgttcagc
cgcgcctggcaggacagctacggcagtgaagtggatgaacaaaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggagggcgaacagccatga
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