Pseudomonas fluorescens SBW25: PFLU_3547
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Entry
PFLU_3547 CDS
T00899
Name
(GenBank) Uncharacterized protein
KO
K11900
type VI secretion system protein ImpC
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLU_3547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfs02044
]
PFLU_3547
Secretion system [BR:
pfs02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLU_3547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
CAI2797753
UniProt:
C3K7U7
LinkDB
All DBs
Position
1:complement(3933375..3934850)
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AA seq
491 aa
AA seq
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MTTPQHALPAQTADEYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTDFRENIKIELLNVSR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAAPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccacaacacgcgctaccggcacaaaccgctgatgaatacagcatcctcgac
aacatcgttgcccagacgctactgagtgccgatgacgaagcgtatggcattgccaaacgg
ggtgtctcggcgtttatcgaagagttgatcaagccgcagaaccgtggcgagccggtaaaa
aaacgcttggtcgaccggatgattgccgagatcgacaccaagctcagtctgcaaatggac
gagatattgcaccacccggactttcaggccctggaagcgtcctggaaagggctccagttg
ttggtggatcgcaccgactttcgcgaaaacatcaagatcgaactcttgaacgtttcccgg
caagacctgctggaagacttcgaagactcaccggaagtgacccagtcgggcttgtacaaa
catatctacagtgctgaatacggccagtttggcggtcagcctgtgggcgcgatcattgcc
aactattttctgtcgcccagcgcgcctgatgtaaagctgatgcaatacgcttccagtgtg
gcttgcatggcgcatgcgccctttatcgccgcagccgcgccagcgttcttcgggttggag
agcttcaccggcttaccggatctcaaagatctgaaggaccatttcgaaggcccgcaattt
gccaaatggcaaagctttcgccagagcgaggacgcgcgttacatcgggttgaccgtgccg
cgtttcttgctccgtacgccttatgaccccctcgaatgcccggtcaagacctttgcctac
caggaaaacgtggtcaacagccacgaacattacctgtggggcaatacagcctacgccttt
gccacgcgcctgaccgatagcttcgcgcgctttcgctggtgcccgaacatcatcggcccg
caaagcggtggcgcggtagaagacttgccgttgcatcacttccacagcatgggggagatt
gaaaccaagatcccgaccgaagtgctggtttccgaccgtcgtgaatacgaactggcgcaa
gagggcttcattgccttgacgatgcgcaagggcagtgacaacgccgcgttcttctctgcc
agctcggtacaaaagccgaaacacttcggcctcagccccgagggcaaggaagcagagctg
aattaccgcttgggaacacagttgccctacatgatggtggtcaatcgcctggcccattac
ctcaaggtccttcagcgcgaacaactgggttcatggaaggagcgcaccgacctggagctg
gagctcaataaatggattcgccagtacgtcgccgaccaggaaaaccccagtgccgaagtg
cgcgggcggcgccccttgcgcgcagcacgcatcgttgtcagtgatgtcgagggtgagcct
ggctggtatcgcgtcaacctgagtgtgcgaccgcacttcaagtacatgggggcggatttc
acgctgtccctggttggcaagctcgataaagaatga
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