Pseudomonas fluorescens SBW25: PFLU_3556
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Entry
PFLU_3556 CDS
T00899
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase) (EC (PLP-independent amino acid racemase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00300
Lysine biosynthesis
pfs00470
D-Amino acid metabolism
pfs01100
Metabolic pathways
pfs01110
Biosynthesis of secondary metabolites
pfs01120
Microbial metabolism in diverse environments
pfs01230
Biosynthesis of amino acids
Module
pfs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFLU_3556
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLU_3556
Enzymes [BR:
pfs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFLU_3556
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAI2797762
UniProt:
C3K7V6
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All DBs
Position
1:complement(3942795..3943598)
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AA seq
267 aa
AA seq
DB search
MLLPFVKMHAHGDDFIIIDRRGLDDPITAAIARQLGNRHTGIGFNQLAVVYDCEEAAARI
SFWNANGTPLATCGSATRGVADRLMHETGKDSIVLRTDRGLLTCVRAPGRQVSVDMGEPS
LEWTAVPLSDAMDTLTLPVEGSPAACSMGNPHCTFFVDDIAAVDVAGLGPALEIHPLFPA
RTNVHFVQVLDRSHIRLRIWERGGGVALGSGSCCCGAVVNGIRRGLLDATVQVQCDGGTV
TVQWTGEGGVVLTGSVEPVMQGSAYVP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgccgttcgtaaagatgcacgcccacggcgacgacttcatcatcattgatcgc
cgtggcttggacgatccgatcaccgcggccattgcccgtcagttgggcaaccgtcacacc
ggtatcggcttcaaccaattggccgttgtgtacgattgtgaagaggcggccgcacgtatc
agcttctggaacgccaacggcacgccgctggccacttgcggcagcgctacccgtggcgtg
gccgatcggttgatgcatgaaaccggcaaggattcgatcgtgctgcgtaccgaccgcggc
ctgctgacctgcgtgcgtgcgccggggcggcaagtgtcggtggacatgggcgagccctcg
ctggagtggacggccgtgcctctgtccgacgcgatggacaccttgacattgcctgtcgaa
ggcagcccggcggcgtgcagcatgggcaacccccactgtacgtttttcgtcgacgacatc
gcggctgtcgacgtagcaggcctgggcccggcgttggagattcatccgctgttcccggcc
aggaccaatgtgcatttcgtgcaagtgctcgaccgtagccatatccgcctgcgcatctgg
gagcgcggtggcggtgtggcgttggggtcggggtcgtgctgctgtggggcggtagtcaat
gggatccggcgcgggctgctggatgccactgtgcaggtgcagtgcgacggcggcacggtg
accgtgcagtggacgggcgagggcggtgtggtattgaccggcagtgtggagccggtgatg
cagggcagcgcctacgtgccttga
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