Pseudomonas fluorescens SBW25: PFLU_3568
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Entry
PFLU_3568 CDS
T00899
Name
(GenBank) Putative RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLU_3568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfs03021
]
PFLU_3568
Transcription machinery [BR:
pfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLU_3568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_7
HTH_11
HTH_24
GerE
TnsD
Motif
Other DBs
NCBI-ProteinID:
CAI2797774
LinkDB
All DBs
Position
1:complement(3953973..3954479)
Genome browser
AA seq
168 aa
AA seq
DB search
MICMSSSLNLPVEALYCEHHGWLYRWLDRKLGNASDAADLAHDTFMRLLTRQHSAGFGSE
PRALLTHIAKGLMIDSWRRQEVERAYLETIAHLPEQEVPSPETRWLILEALYRIEAMLRD
LPDKTRQAFLMSQIDGLTYAQIAEELKVSLVSVKRYMRDAFLACLSVA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgatctgcatgtcgtcttcgctcaatctgcctgtcgaggcgctgtactgcgaacaccac
ggatggttataccgctggctcgaccgcaagttgggcaacgccagcgatgcggccgacctg
gcccacgacaccttcatgcgcctgctcacccggcagcacagtgcgggtttcggcagcgag
ccgcgtgcgttgcttacccacatcgccaagggcttgatgatcgacagttggcgccgccag
gaagtcgagcgcgcttatctggaaaccattgcccacttgccggagcaggaggtgccgtcg
ccggaaacccgctggctgattcttgaggcgctgtaccgcatcgaagccatgctgcgcgat
ttgccggacaagacccgccaggccttcctgatgtcgcagatcgatggcctgacgtacgcg
cagatcgccgaggaattgaaggtgtcgctggtctcggtcaaacgctacatgcgcgatgcg
ttcctggcatgcctgagcgtggcatga
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