Pseudomonas fluorescens SBW25: PFLU_3747
Help
Entry
PFLU_3747 CDS
T00899
Name
(GenBank) Putative sigma-54 activated regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfs03000
]
PFLU_3747
Transcription factors [BR:
pfs03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFLU_3747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
nSTAND6
AAA_2
AAA_3
AAA
HTH_7
HTH_23
Mg_chelatase
AAA_7
HTH_22
AAA_16
HTH_20
PAS
nSTAND3
HTH_10
HTH_psq
DUF2089
HTH_28
MCM
HTH_11
HTH_Tnp_1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CAI2797946
UniProt:
C3JY05
LinkDB
All DBs
Position
1:4144751..4146562
Genome browser
AA seq
603 aa
AA seq
DB search
MAEPLAHDTLIQESWRRCRAFGLDHQSTPSFDQLPAEGISQLLESQHSLVQTTHQEVLPY
YENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLARGFNPGASWRERSSGTNAIGTALA
CAQAVHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSSDSYLPPSHTLGMVKMMSQ
TVENRLILNLFRGEHFQLTFNTGLSNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR
VMIDSLFKVSLLELLNQPEGLPFSLQAAGRNRFQCLLRRPKQVPVQARVFTEPTPPKPAS
IGLKTLHFGDVRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRSQKAFIA
VNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQARLL
RVLQERCVQPVGSSELFPVDLRIISATNRALRELVQAGRFREDLYYRIGGLTLELPPLRE
RTDKRALFQQLWQQHREPTQWAGLSAEVLALFEQHPWPGNLRQVSSVLQVALAMAEEQPI
RPEHLPDDFFVDLNVESPLPASEYLDASIDLNQRLKAVGGNISHLARELGVSRNTLYKRL
RQH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccactggctcacgacacccttatccaggaatcctggcgccgttgtcgcgcc
tttggcctggaccaccagagcacgcccagcttcgaccagctccccgccgagggcatcagc
caattgctggagagccagcactcgctggtgcagaccacgcaccaggaagtgctgccctac
tacgaaaatatcctcagcaattcaaactgcctgatcatgctggccgacaatcagggccag
gtgctgaccagttggggcacccagcggtttatcgaacccaagctggcgcggggcttcaac
cccggcgccagctggagagaacgctccagcggcaccaatgccatcggcaccgcactggcg
tgtgcccaggcggtgcatatcgaacacgatgaacactttctgaaggccaaccgcttcatg
accggctcggcggcgccgatctttgatgcccagcgcgagatcatcgcggtgctggacgtg
tccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatgatgagccag
accgtggagaaccggctgatcctcaacctgtttcgcggcgaacacttccaactgaccttc
aacaccggcctgagcaacctcgacagccagtgggccggcctgctgatctttgatgaaagc
ggccaagtgctgtcggccaaccggcgtgccgacaacctgctgggcatcagcctgtcgcgg
gtgatgatcgacagtttgttcaaggtgtcgctgctggagttgttgaaccagccggaaggg
ctgcccttttccctgcaagcggcgggacgtaatcggttccagtgcctgttgcggcgaccc
aagcaggtgccagtgcaggcgcgcgtgttcacggagccgacaccgcctaagcccgcctcc
attggcctgaagaccttgcacttcggcgatgtgcgcgtggaaaaagccgtgcgccaggct
gaacgcctgctggagaaggacatcccgctgctgatccacggtgaaaccggcgtgggcaag
gaagtgttcgtcaaggccctgcaccaggccagctcgcgcagccagaaggcgtttatcgcg
gtgaactgtgcggcgattccggccgagctggtggagtcggaactgttcggctacgaaaaa
ggcgcgttcaccggcgccaatcaaaaaggcagcatcggcctgatccgcaaggccgataaa
ggcacgctgtttctcgacgagatcggcgatatgccgctgcctacccaggcccgcttgctg
cgggtattgcaggaacgttgcgtgcagccggtgggcagcagcgagttgttcccggtggat
ttgcgcatcatctcggccaccaaccgcgcgctgcgcgagctggtgcaggccgggcgtttt
cgtgaggatttgtactaccgcatcggcggcctgaccctggagctgccgccgttgcgcgag
cgcaccgacaaacgggcgctgttccagcaactgtggcagcaacaccgtgagccgacccag
tgggcgggcctgagcgccgaggtgctggcgctgttcgaacagcatccgtggccggggaat
ttacgccaagtgagcagcgtgttgcaggtcgcgctggcgatggctgaagaacagccgatc
cgcccggagcatctgccggatgatttttttgtggatttgaacgtggaatcgccgctgcct
gccagtgaatacctggatgccagcatcgacctgaaccagcgtttgaaggccgtcggcggg
aatatttcccacctggcgcgggagctgggggtaagccgcaataccctgtacaagcgcctg
cgccagcactaa
DBGET
integrated database retrieval system
