Pseudomonas fluorescens SBW25: PFLU_3879
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Entry
PFLU_3879 CDS
T00899
Name
(GenBank) Putative exported protein
KO
K09800
translocation and assembly module TamB
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfs02000
]
PFLU_3879
Transporters [BR:
pfs02000
]
Other transporters
Pores ion channels [TC:
1
]
PFLU_3879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
CAI2798075
UniProt:
C3JYE1
LinkDB
All DBs
Position
1:complement(4275192..4278866)
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AA seq
1224 aa
AA seq
DB search
MMRGVKIAGLAVMALLGGLLLALWAVLGTQAGSRWALGRVPGLSVEHFQGHLGGQWSADH
VLWQQDSSRVELQAPQWDWSPACLLRMTLCIDRLDVEQVSLQFPPSTEESSGPIALPELK
LPLAIQLGDVRVGSLLFNGSEELKGLQLAAHWTAAGLQIDSVHVQRDGLVLDLAGLLQPI
GDWPLSASGNLSLPYAPGGAPWQVALNVDGDLLKTLKLNADSSGYLPAKLTGELQPLVEN
LPAQLHLTADGFKPSADLPDTLQLNQLDLTAKGDLNSGYQLLGKAVLPAEKGPVDLLLQG
KVDAKGAQIAGLDLNAGDKQSLKLTAQLDWQQGFSAEAKIDWLDFPWHRLYPVIDEPQVA
LRTFNGEISYKDGNYLGNLKADLDGPAGKFNVVTPFSGDLKQIFLPELKLTAGQGRAEGH
LNLQFADGIAWDTALDLSALNPAYWVAELPGTLAGPLRSKGEFKNEHLKLNADLDLKGRL
RGQTAVLAAKADGAGEQWTLANLDIRLGDNRINGSGSLQQRLAGQIDIKLARLAQLWPQL
RGQVNGRLDVAGSLKAPQGKLGLKGQQLAFADNRLQSLTLDASLDNAQRAKIDLKGNGIQ
SGDTQVGTLTASAQGDIQQQKVQLDLVGPLVKLALALDGTLDKGNWRGRLASGDVQAGGQ
DWKLQAPAKIERLADGKLTFAAHCWVSGPASLCGEDQRLMPEPKLRYHLKQFPIDSLAAF
LPKDFAWQGKLNADLQLDLPDSGPKGLVSVDASGGILRVKDKDQWLDFPYDTLKLETTLN
PKRIDTQLNFRGGKLGELMLQAQINPLPKNKPIIGNFSLVGLDLAVARPFVPMVETLSGK
LNGNGRISGGLLAPQVNGNVNLVGGEIAGPELPISLEGLNVQALIAGESVQLNGGWRSGK
AGQGSLKGQIDWGQALVVDLSLQGSQLPVTVEPYAVLEVAPDLKISLKNDKLAVAGKVHI
PRGDITVRELPPSTVKVSDDTVIIGSQTEEGKPPMAMAMDIDVVVGEDKLNFSGFGLTAK
VQGQVHIGDNLDTRGELWLNDGRYRAYGQRLDVRRARLLFAGPLDQPYLDIEAIRKTDDV
VAGIRLSGSAEQPTTQIFSEPAMSQEQALSYLVLGRPLSSTGEDNNMLAQAALGLGLMGS
AGVTSDLANKLGIQDFDLDTQGSGNNTAVVASGKITEKLSLRYGVGVFEPASTIALRYLL
SKKVYLEVASGVASSLDIFYKRDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtgatgcgtggtgtgaaaatagcagggttggccgtgatggccctccttggggggctgttg
ctggcactgtgggcggtacttggcactcaggcgggcagccgctgggcgttggggcgtgta
ccggggttgagcgtagagcatttccaggggcatctgggcggccaatggagcgccgaccat
gtgttgtggcagcaggacagcagtcgcgtcgaactccaggccccccaatgggattggtcg
ccggcgtgcctattgcgcatgaccttgtgtatcgaccgcttggacgtggaacaggtcagc
ctgcaattcccgccaagcaccgaggaaagcagcgggccgatcgcactgcctgagttgaaa
ctgccgctggccatccagctgggcgacgttcgcgtcggtagcctgctgtttaacggcagc
gaagaactcaaaggcttgcaactggcggcgcattggaccgccgccggcctgcagatcgac
tcggtgcatgtgcagcgcgatggcctggtgctggacctcgccggcctgctgcaacccatt
ggcgactggccgttgagcgccagcggtaacctgagcctgccctacgcgccgggcggcgca
ccgtggcaggtcgctctcaacgtcgacggcgacctgctcaagaccctcaagctcaatgct
gacagcagcggctacctgccggccaagctcaccggcgagctgcaaccgctggtggaaaac
ctcccggcccaattgcacctcactgccgacggcttcaagcccagcgccgatctgcccgac
accttgcaactcaatcaactcgacctcaccgccaaaggcgacttgaacagcggctaccaa
ttactgggcaaggccgtgctgccggcggaaaagggcccggtggacttgctgctgcagggc
aaggtcgacgccaaaggcgcgcagattgccggcctggacctgaatgccggtgacaagcaa
agccttaagctgaccgcccaactcgattggcagcaaggcttcagcgccgaggccaagatc
gattggctggatttcccctggcatcgcctctatccggtgatcgacgagccgcaagtcgcg
ctgcgtacgttcaatggtgagatctcctacaaggacggcaactacctgggcaacctcaag
gccgacctcgatggcccggcgggcaagttcaatgtggtcacgccgttcagtggcgacctt
aaacaaattttcctgcctgaactgaaactcaccgctggccaaggcagggctgaaggccac
ctgaacctgcaattcgccgacggcattgcctgggacacggccctcgacctgtcggcgctg
aacccggcttactgggtggctgaattgcccggcaccctggccgggccgttgcgcagtaaa
ggcgagttcaagaacgagcacctcaagctgaatgccgacctcgacctcaagggccgcctg
cgcggtcaaaccgcggtgctggcggccaaggccgacggggcgggcgaacagtggacgttg
gctaacctggatatccgcctcggcgacaaccgcatcaacggcagtggcagcctgcaacaa
cgcttggccgggcagattgatatcaagctggcgcgcctggcccagttgtggccgcaactg
cgcgggcaggtcaacggccgacttgacgtggccggcagtctcaaggcgccccaaggcaaa
ctgggcctcaagggccagcaactggcgtttgccgacaatcgcctgcaaagcctcaccctc
gatgccagcctggacaatgcccagcgcgccaagatcgacctcaagggcaacggcatccag
tccggcgacacccaggttggtaccctgaccgccagcgcccaaggcgatatccagcagcag
aaggtccagctggacttggtcggcccgctggtcaagctggccctggccttggatggcact
ctcgataaaggcaactggcgcgggcgcttggccagcggtgatgtacaagccggcgggcag
gactggaagctgcaggcgccggcgaagatcgagcgcctggccgatggcaagctcactttt
gccgcgcactgctgggtgtccgggcccgccagcctgtgcggcgaagaccagcgcctgatg
ccggaaccgaaactgcgctaccacctcaagcaattccccatcgacagcctggcggcgttc
ttgcccaaggattttgcctggcagggcaagctcaacgccgacctgcaactggacctgccg
gacagcggccctaaaggcctggtctcggtggacgccagtggtggcatcctgcgcgtcaag
gacaaggaccagtggctggatttcccttacgacaccctgaagctggaaaccacccttaac
cctaaacgcatcgacacgcagctgaacttccgtggcggcaagctcggtgagttgatgctg
caggcgcagatcaacccgttgccgaagaacaaaccgatcatcggcaacttcagcctcgtc
gggctggacttggcggtggcgcggccgtttgtaccgatggtggaaaccctcagcggcaag
ctcaatggcaatggtcgtatttccggtggcttgctggcaccgcaggtcaacggcaacgtg
aacctggtgggtggcgagattgccgggccggaactgcccatcagcctcgaaggcttgaat
gtgcaagcgctgatcgcgggcgaaagcgtgcagctcaacggtggctggcgcagcggcaag
gcggggcagggcagcctcaagggccagatcgactggggccaggcgctggtcgtggacctc
agcctgcaaggctcgcaactgccggtcacggttgaaccgtacgccgtgctggaggtggcg
cccgacctgaaaatcagcctgaagaacgacaagctggcggtggccggtaaagtgcacatc
ccgcgtggcgatatcaccgtgcgtgagctgccgccgtccaccgtcaaagtctcggatgac
acggtgatcatcggcagccagaccgaggagggcaagccgccgatggcgatggccatggat
atcgacgtggtggtgggcgaagacaagctcaacttctcgggcttcggcctcactgccaag
gtgcagggccaggtgcatatcggcgacaacctcgacacccgtggcgagctgtggctcaac
gatggccgctaccgtgcctacgggcagcggctggatgtgcgacgagcgcgcttgttgttc
gccgggcccctggaccagccgtacctggacatcgaagcgatccgcaagaccgatgatgtg
gtcgccggtatccgcctgagcggcagtgccgagcagcccaccacgcaaatcttctcggaa
ccggccatgagccaggaacaggcgctgtcgtatctggtgctggggcgtccgttgagcagc
accggcgaagataacaatatgctcgcgcaagccgcattgggcctggggttgatgggcagc
gccggggtcacctcggaccttgcaaacaagttgggtatccaggacttcgacctcgacacc
cagggcagcggtaacaacaccgccgtggtggccagcggcaagatcaccgagaaactcagc
ctgcgttacggcgtgggcgtgttcgagcccgccagcacgattgccttgcgctacctgttg
agcaagaaggtgtatctggaagtggcaagcggcgtggccagctccctggatatcttctac
aagcgcgatttctaa
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