Pseudomonas fluorescens SBW25: PFLU_3882
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Entry
PFLU_3882 CDS
T00899
Name
(GenBank) Exodeoxyribonuclease III (EC
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLU_3882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_3882
Enzymes [BR:
pfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PFLU_3882
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PFLU_3882
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAI2798078
UniProt:
C3JYE4
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All DBs
Position
1:4281474..4282286
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK
GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP
TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF
LPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGL
LPRVKDAGVDYDLRGLEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctccttcaatatcaacgggctgcgcgcccgccctcatcagctggcggcg
ctgattgaaaagcaccagcccgacgtgatcggcctgcaggaaaccaaggtccacgatgac
caattccccctcgccgaagtacaagccctgggctatcacgtgtactaccacgggcagaaa
ggccactacggtgtggccctgctctcgcgccagccggcgctaagcctgcacaaaggcttt
gccagtgacgaagaagacgcccagcgccggtttatctggggcactttcgccgacgaacat
ggccagccagtgaccatcatgaacggctatttcccacaaggcgaaagccgcgaccacccc
accaaattcccggccaagcagcgcttttacgaagacctgcaacagttgctggaaagccag
ttcagcaatgaccaggcgctggtggtgatgggcgacgtgaacatttccccggaagactgc
gacatcggcatcggcgccgacaacgccaagcgttggctgaaaaccggcaagtgcagcttc
ctgccggaagaacgcgaatggatggcgcgcctgaaaaactggggcctggtggacagcttc
cgccacttgaacccggacgtggtggaccgcttcagctggttcgactaccgtagccgtggg
ttcgaagatgagcccaagcgcggcctgcggattgacgtgatcatggcgtccaatggcctg
ctgccgcgggtcaaggacgccggggtggactacgacctgcgcgggttggaaaagccgtcg
gaccatgcgccgatctggctggaactgagctga
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