Pseudomonas fluorescens SBW25: PFLU_4208
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Entry
PFLU_4208 CDS
T00899
Name
(GenBank) UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFLU_4208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_4208
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLU_4208
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PFLU_4208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
HAMP
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
CAI2798399
UniProt:
C3JZV1
LinkDB
All DBs
Position
1:complement(4650898..4652913)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccaactcgtcacccgctttgaacccgctggcgatcagccggaagccatt
cgccagatggtcgaaggcatcgaggccggcctggcccaccagacgctgctcggggtgacc
ggttcgggcaagaccttcagcatcgccaacgtgatcgcgcagatcaaccgccccaccttg
gtgctggcgccgaacaaaaccctggccgcgcagctctacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtatttcgtttcctattacgactactaccagcccgaagcctac
gtgccgtcttccgatacctttatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcggctgtcggcgaccaaggcgctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcagcccggaaacctatttgaagatggtgctgcacgtt
gatcgcggcgacaagctcgaccagcgcgagctgctgcgtcggctgaccagcttgcaatac
acccgcaacgacatggactttgcccgcgccaccttccgggtgcgtggtgacgtgatcgac
atctacccggccgaatccgacctggaagcgatccgcatcgaactgtttgacgatgaagtc
gagagcctgtcggccttcgacccgttgaccggcgaagtgatccgcaagctgccgcgcttc
accttctatccgaaaagccactacgtgaccccgcgtgaaaccctcatgggcgccatcgag
ggcatcaaggtcgagttggccgagcgcctggaatacctgcgctccaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgctttgacctggagatgatcctggagctgggg
tactgcaacggtatcgaaaactactcgcgctacctgtcgggccgtgaatccggcgcgccg
ccgccgaccctctacgattacctgccgcccgacgcgctgctggtgatcgacgagtcccac
gtcagcgtgccgcaggtcggcgcgatgtataagggcgaccgctcgcgtaaagaaaccctg
gtggaatacggtttccgcctgccgtcggcgctggataaccggccgatgcgctttgatgag
tgggaagccatcagcccgcaaaccatttttgtgtcggccacgccgggcaactacgaggcc
gagcatgcgggccgcgtgatcgagcaactggtgcgtccgaccgggctggtcgacccagaa
atcgaaatccgcccggcgttgacccaggtggatgacttgctctcggaaatcaccaagcgc
gtggccctcgaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacttg
accgactacctggccgaccacggcgtgcgcgtacgctacctgcactcggacatcgacact
gtggaacgggtggaaatcatccgcgacctgcgcctgggcaccttcgatgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggcgatccttgat
gccgacaaagaaggcttcctgcgctccgagcgctcgttgatccagaccatcggccgcgcc
gcgcggaacctcaacgggcgggcgattctttatgcggaccgcatcaccgggtctatggaa
cgcgcgattggcgagacccaacgccgtcgcgacaagcagattgccttcaacctggaaaat
ggcatcaccccgaaaggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggcgaaggctgccgaggaaagcgccaag
tacgaaaacgaactgcgctcgccgagtgagatcaccaagcggattcgacagctggaagag
aagatgtaccagttggcgcgggatctggagtttgaggcggcggcgcagacgcgggatgag
attggcaagttgcgtgagcgcttgcttgccgtctga
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integrated database retrieval system
