Pseudomonas fluorescens SBW25: PFLU_4417
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Entry
PFLU_4417 CDS
T00899
Name
(GenBank) RNA polymerase sigma factor FliA (RNA polymerase sigma factor for flagellar operon) (Sigma F) (Sigma-28)
KO
K02405
RNA polymerase sigma factor FliA
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02020
Two-component system
pfs02025
Biofilm formation - Pseudomonas aeruginosa
pfs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLU_4417
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLU_4417
09142 Cell motility
02040 Flagellar assembly
PFLU_4417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfs03021
]
PFLU_4417
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pfs02035
]
PFLU_4417
Transcription machinery [BR:
pfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLU_4417
Bacterial motility proteins [BR:
pfs02035
]
Flagellar system
Flagellar assembly proteins
Stator
PFLU_4417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
CAI2798595
UniProt:
C3K0I0
LinkDB
All DBs
Position
1:complement(4881654..4882394)
Genome browser
AA seq
246 aa
AA seq
DB search
MTANGYNAYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHMEPSRDLEDE
RFQGALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaacggctataacgcttacaaaaagtcggcccgtgacagccagggtgagttg
atcgagcgctatgcgccactggtcaagcgcatcgcctatcacttgctggcacgcctgccc
gccagcgtccaggtcgaagacctgatccaggcgggcatgatcggtttgctcgaagtgtcg
accaaatacgacgcgagcaaaggggcgagcttcgagacgtatgcggggatccgtatccgt
ggcgcgatgctcgacgaggtgcgtaaaggtgactgggcaccacgttcggtgcatcgcaat
acgcgcatggtcagtgacgcaattcgcgcaattgaagcaaaaaccggtcgcgacgctaaa
gatcacgaagttgcggccgaactccaattgagtctcgacgattattacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctcttgcaggacggcgagcacgaa
gggctgcacgaggatggcgcgagtgctcatatggagccgtcgcgtgacctggaggatgaa
cgcttccagggtgcgctggcggacgcgattgccaatttgccggaacgtgagcggttggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgggtcagccagttgcacagccagtgcgcagcccgcttgcgggggcgtttg
ggagagtggcgagcgcgctga
DBGET
integrated database retrieval system
