Pseudomonas fluorescens SBW25: PFLU_5223
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Entry
PFLU_5223 CDS
T00899
Name
(GenBank) Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase)
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00550
Peptidoglycan biosynthesis
pfs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFLU_5223
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pfs01003
]
PFLU_5223
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfs01011
]
PFLU_5223
Enzymes [BR:
pfs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PFLU_5223
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFLU_5223
Glycosyltransferases [BR:
pfs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PFLU_5223
Peptidoglycan biosynthesis and degradation proteins [BR:
pfs01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PFLU_5223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
CAI2799370
LinkDB
All DBs
Position
1:complement(5730162..5732486)
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AA seq
774 aa
AA seq
DB search
MTRTRSPRSRKKPPSRGLRPWLGWALKLGLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFTGQKLSKDDFLTELDALGYRREPVSNGPGAAAVSGNTVDLNTRGFQFYEG
LEKAQPVRVRFSGDYVAELSSLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYL
LETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH
QVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRG
KLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGR
KGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKP
SKYTLTSWLSDDPLSVKGADGQVWTPQNFDRRSHGTIFLYQGIAHSYNISTSRLGLEVGV
PNVLKTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKTGTSNDSR
DSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLNMPQPDNIVQA
WIDPHTGQGSDANCPGAVQMPYIRGSEPPPGAACGGSAPADAESVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaacccgatctccccgttcccgtaaaaaacctccttcccgcggcctgcgccct
tggctgggctgggcgctcaagctcggcctcgtgggcctcgtagtgctcgccggctttgcg
gtgtacctcgacgctgtggtccaggagaagttctccggcaagcgttggaccattcccgcc
aaggtgtatgcacgcccgctggagttgtttaccggccagaagctgagcaaggatgacttc
ctgaccgaactcgacgccttgggctatcgccgcgaacccgtgagcaacgggccgggcgcg
gcggctgtcagtggtaacaccgtcgacttgaatacccgcggtttccagttctatgaaggc
ctggaaaaagcccagcctgtgcgcgtgcgcttttccggcgattacgtcgctgagttgtcg
tccctcaatggctcgaagctgccggtggttcgcctcgaaccgctgatgatcggcggcatt
taccctaaaaaccttgaagatcgcatcctgatcaagcttgaccaggtgccgccgtacctg
ttggaaaccctggttgctgttgaagaccgcgatttctaccaccactggggcgtttcgccg
aagtcgatcgcccgcgcggtctgggtgaacacttccggcggcaagatgacccagggcggc
agtacgctgacgcaacagttggtcaagaacttctacctgaccaacgagcgtagcctcacc
cgtaagctcactgaagccatgatggcgatgctgctggagctgcactacagcaagcaggaa
atccttgaggcgtacctcaacgaggtattcgtcggccaggatggccagcgcgccgtgcat
ggtttcggcctggccagccagttcttctttggccagccgctgtccgaactgaagctgcac
caggtggcgttgctggtgggcatggtcaaggggccttcctactacaacccgcgccgcaat
cctgagcgtgcgctggagcgacgcaacctcgtgcttgatgtacttgagcaacaaggtgtt
gccacggctgaacaggtcgctgccgcgaagaaaatgccgttgggtgtcactacccgcggc
aagctggcggacagctccttcccgggctttatcgatctggtcaagcgccaactgcgtgaa
gactaccgcgacgaagacttgaccgaagaaggcctgcgaatcttcaccagtttcgacccg
atcctgcagatgaaggccgaagcgtccgtcaatgacacgttcaagcgtctgacaggccgt
aaaggttccgatgaagtcgaagcggccatggttgtgaccaatccggaaacgggtgaagtg
caagccatgatcggcagccgtcaggccagctttgccgggttcaaccgcgcgctggatgcg
gtgcggccaatcggttccctggtcaagcctgcggtttacctgaccgcgttggaaaaaccg
agcaaatacaccctgaccagttggctctcagatgacccgctgtcggtcaaaggtgccgat
ggccaagtgtggacaccccagaacttcgaccgtcgttcccacggtacgatattcctgtat
cagggcattgcgcattcctacaatatttccacgtcgcggctgggccttgaggtcggcgtg
ccgaatgtcctcaagaccatcgcgcggctgggtgtcactcgtgagttcccggccttcccg
tcgatcctgttgggcgctggcgcgatgaccccgatggaagtcgcgacgatgtaccagacc
ctcgccaacggtggtttcaacacccccatgcgcgggatccgcagcgtgctgaccgccgag
ggtgagccgctcaagcgctacccgttccagattcagcaacggtttgatgcgggctccatt
tatctgatccagaacgccatgcagcgcgtgatgcgtgaaggtaccgggcgttcggtctat
agcgtgctgccggcgaacctgacattggcaggcaagaccggtaccagtaacgattcgcgt
gacagctggttcgcaggtttcggccaggacgtgctggcggtggtgtggctggggcgcgac
gataacggcaagacgccgtttaccggtgccaccggtgcgctgcaggtctggaccagtttc
atgcgcaaagctgatccgctgccgttgaacatgccgcagccggataacatcgtgcaggct
tggatcgatccgcacacggggcagggctcagatgccaactgtccgggcgcggtgcagatg
ccgtatattcgcggcagcgaaccgcctcccggcgccgcatgcggtggcagtgcccccgct
gatgcggagtcggtgatggattgggtcaagggctggatgaattaa
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