Pseudomonas fluorescens SBW25: PFLU_5254
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Entry
PFLU_5254 CDS
T00899
Name
(GenBank) Transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfs03021
]
PFLU_5254
03009 Ribosome biogenesis [BR:
pfs03009
]
PFLU_5254
Transcription machinery [BR:
pfs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PFLU_5254
Ribosome biogenesis [BR:
pfs03009
]
Prokaryotic type
rRNA transcription factors
PFLU_5254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF2187
Motif
Other DBs
NCBI-ProteinID:
CAI2799400
UniProt:
C3K260
LinkDB
All DBs
Position
1:complement(5768009..5769490)
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAQVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDTVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggca
aacgtgatttttgaagcgctggagctggccctggccactgctaccaaaaagcgttttgaa
gacgaagttgatctgcgtgtggaaatcaaccgccacaccggtgcctatgagactttccgt
cgctggacggtcgtcgaagaggccgatcttgatgatccggccatcgaaacctggccaagc
aaggttgccgaaacgcatccaggcgcccaggtcggtgatgtcgtcgaagaaaagatcgag
tcgatcgaattcggccgtattgctgcacagaccgccaaacaggtcatcgtgcagaaggtt
cgcgaagctgagcgcgctcaagtcgttgacgcctatcgcgaacgcctgggtgaaatcatc
tccggcaccgtgaaaaaagtaacccgcgacaacgtgatcgttgacctgggcaacaacgcc
gaagcgttgctggcccgcgaagacatcatctctcgcgaaaccttccgggttggcgtgcgc
ttgcgtgcgctgctcaaggaaatccgcaccgagaaccgcggccctcagttgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggaaattgccgaa
ggcctgatcgaagtcatggctgcgtcccgcgacccgggttcgcgcgccaagatcgcggtt
cggtccaaggacaaacgcatcgacccgcaaggcgcttgcattggtatgcgcggttcgcgc
gtccaggcagtgtcgggcgaactgggtggtgagcgtgtggacatcgtcctgtgggacgat
aacccggcgcagttcgtgatcaacgccatgtcgccagctgaagtggcggcaattatcgtt
gacgaggatgcccatgcaatggacatcgccgttggcgcagacaatctggctcaggccatt
ggtcgtggtggtcagaacgtgcgtctggcgagccaactgaccggttggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggtgacatcctgcgcaac
ttcatcgacgagctggaagtcgacgaagacctggcacaggtgctggtagatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacaccgtcaacgagcttcgcgctcgggccaaggatcgtttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgatctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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