Pseudomonas fluorescens SBW25: PFLU_5330
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Entry
PFLU_5330 CDS
T00899
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00260
Glycine, serine and threonine metabolism
pfs00460
Cyanoamino acid metabolism
pfs00630
Glyoxylate and dicarboxylate metabolism
pfs00670
One carbon pool by folate
pfs00680
Methane metabolism
pfs01100
Metabolic pathways
pfs01110
Biosynthesis of secondary metabolites
pfs01120
Microbial metabolism in diverse environments
pfs01200
Carbon metabolism
pfs01230
Biosynthesis of amino acids
pfs01240
Biosynthesis of cofactors
pfs04981
Folate transport and metabolism
Module
pfs_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PFLU_5330 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PFLU_5330 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFLU_5330 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PFLU_5330 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PFLU_5330 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PFLU_5330 (glyA)
Enzymes [BR:
pfs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PFLU_5330 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CAI2799473
UniProt:
C3K2D3
LinkDB
All DBs
Position
1:5858604..5859857
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQTMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtggttgagcagttggccatcgac
cgtgcaaaagaactgttcggcgccgattacgccaacgtccagccgcacgccggttcccaa
gccaacagcgccgtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcgtcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggatttcccacgcttccgcgccatcgccgacaaggtgggcgcgtacctgttcgttgac
atggctcacgtagccggtctggtcgccgctggcgtctacccgaacccggtgccttacgct
gacgtagtgaccacgactacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcacgcgccaacgccgagatcgagaagaagctgaactccgccgtattccctggcgcccaa
ggtggcccgctggagcacgtcatcgccgccaaagcgatctgcttcaaggaagcgctgcag
cctgagttcaagacttaccagcaacaagtggtgaaaaacgcccagaccatggccagcgtg
tttatcgagcgcggctttgacgtggtgtccggcggtactgagaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgctgacgctgccctgggcaaagccttc
atcaccgtgaacaagaactctgtgccgaacgacccacgttcgccgttcgtgacttcgggc
ctgcgcttcggcaccccggcggtgaccactcgcggcttcaaggaagcggagtgcaaggaa
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagccgtgatcgacgcg
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtgtacggcgcttga
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