Pseudomonas fluorescens SBW25: PFLU_5384
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Entry
PFLU_5384 CDS
T00899
Name
(GenBank) Putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03030
DNA replication
pfs03430
Mismatch repair
pfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLU_5384
03430 Mismatch repair
PFLU_5384
03440 Homologous recombination
PFLU_5384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfs03032
]
PFLU_5384
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_5384
Enzymes [BR:
pfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLU_5384
DNA replication proteins [BR:
pfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFLU_5384
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFLU_5384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAI2799526
UniProt:
C3K2I6
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All DBs
Position
1:complement(5914718..5915329)
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AA seq
203 aa
AA seq
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MERIAVIDFETTGITPNSHCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDYELGLIRRTRLQKFACSLLLA
RRLMPTAPNHKLGTLNAFAQLPHTGKAHRAMADAEMAANLTAHLAQELRSTHGLRELSHE
LLCTLQKVPAAKINEHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcattacgccgaacagtcattgc
cgggccacggagatcgctgtggtcatccttgagcgtggccagatcgtggaccgctaccag
agcctgatgaacgccggcgtgcgcgtgccgggctttatcgaacaactcaccggcatcagc
aacgccatgctgcgcagcgcgccaccggccgagcgggtgatgaacgaagtcaacgaattc
gtcgggaccacgccactgatggcgcacaacgccgcgttcgaccagaaattctgggactac
gaactgggcttgatccgccgcacccgcctgcaaaaattcgcctgctccctgctactggct
cgccgcttgatgcccaccgcgcccaaccacaaactcggcacgctcaacgccttcgcccaa
ctgccccacaccggcaaggctcaccgggcgatggcggatgcggagatggccgccaacctg
accgcgcacctggcccaggaactgcgcagcacccacggcttgcgcgagctatcccacgaa
ctgctgtgcaccttgcagaaagtgccagcggcgaagatcaatgagcacctgaagaagcat
cgcgggttctga
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