Pseudomonas fluorescens SBW25: PFLU_5460
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Entry
PFLU_5460 CDS
T00899
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit (EC (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit)
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PFLU_5460 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_5460 (xseB)
Enzymes [BR:
pfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PFLU_5460 (xseB)
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PFLU_5460 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
CAI2799599
UniProt:
A0AA35I510
LinkDB
All DBs
Position
1:5990982..5991224
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AA seq
80 aa
AA seq
DB search
MARKKVALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQSALAQAEQKVQ
VLLERDGELAEEPFDAEQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagttgcactcgatttcgaacaatccctcgccgacctgcaaaccctg
gtcgagcgtctggagaacggtgagttgtcgctggaagactcgttgaccgcgtttgagcaa
ggcatcggcctgacccgtgactgccagagcgcgctcgcgcaggcggagcagaaggtgcaa
gtactgctggaacgtgacggggagttggccgaagaacctttcgatgcggaacagcccgaa
tga
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