Pseudomonas fluorescens SBW25: PFLU_6025
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Entry
PFLU_6025 CDS
T00899
Symbol
clpB2
Name
(GenBank) Chaperone
KO
K11907
type VI secretion system protein VasG
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs02025
Biofilm formation - Pseudomonas aeruginosa
pfs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFLU_6025 (clpB2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLU_6025 (clpB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfs02044
]
PFLU_6025 (clpB2)
Secretion system [BR:
pfs02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLU_6025 (clpB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
AAA_25
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
AAA_14
AAA_18
Torsin
Clp_N
CbiA
Hpr_kinase_C
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
CAI2800153
UniProt:
C3K4B3
LinkDB
All DBs
Position
1:6585939..6588602
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AA seq
887 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEAL
LSAERERLATLESRWAEEKALVDELLATRATLREKAGAVDSGDDALREQLVDLQQRLSAL
QGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI
AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEA
HTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME
DGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGR
LVTIPYYPLSDEMLKAITRLQLGRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRM
IDTILTNSLLPDMSREFLTRMLEGKAMAGVRISSRDNELHYDFSDAD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccacggtgttctgcaaactgcggggcaacccgtatgtggagcttgcccac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgccagttc
aacgtcgagccggcgcgcctggcccgcgacctgactgaagccctggaccgcctgccacgc
ggctcgacctcgatcaccgacctgtcctcccatgtggaagaagcggtggagcgcggctgg
gtctacggcagcctgatgttcggcgaaagccaagtacgcaccggttatctggtgctcggc
attctcaagaccccgagcctgcgccatgcgctgctgggcttgtcttccgagttcgacaag
atcaaggccgaggccctgagcgagcgctttgatgaatacgtgggcgactcgccggaaaac
gcgctgagcgccagcgacggtttcaacgccggcgccgtgccgggcgaagccagcggtgcc
atggcgcccagtgcgatgggcaaacaggaagcgctcaagcgcttcaccgttgacctgacc
gaacaggcccgcagcggcaagctcgacccgatcgtgggtcgtgatgaggagatccgccaa
ctggtcgacatcctcatgcgccgccgccagaacaacccgatcctcaccggtgaagccggg
gtgggcaagaccgccgtggtcgaaggtttcgccctgcgtatcgtcgccggtgacgtgcca
cccgcgctcaaagatgtggaactgcgcagcctcgacgtgggcctgctgcaagccggcgcc
agcatgaaaggcgaattcgaacagcgcctgcgccaggtcattgaagacgtccaggcctca
cccaagccgatcatcctgtttatcgacgaagcccacaccctggtgggtgccggtggcgcc
gccggcaccggtgacgcagccaacctgctcaagcctgcattggcgcgtggcaccctgcgt
actgtggccgccaccacctgggccgagtacaagaagcacatcgagaaagacccggccctg
acgcgccgtttccaggtggtgcaagtcgccgaaccgtcggaagacaaagcgctgctgatg
atgcgtggcgtggcgtcgaccatggaaaaacaccaccaggtgcagatcctcgacgaagcc
ctggaagcctcggtgaagctgtcccaccgctacatcccggcgcgccagttgccggacaaa
tccgtaagcctgctggacaccgcttgcgcccgcgtcgccatcagcctgcacgcggtgccg
gccgaagtggacgacagccgccgccgcatcgaagccctggaaaccgagctgcagatcatc
gctcgcgagcatgccattggtatcgcgattggcgcgcgtcaaaccaatagcgaagcactg
ttgagcgctgaacgtgagcgcctggcgacgctggaaagccgctgggccgaagagaaagcg
ctggtggacgaactgctcgctacccgcgcgaccttgcgcgaaaaagccggcgccgtagac
agtggcgacgacgctttgcgcgagcaactggtcgacctgcaacaacgcctcagcgcgctg
caaggtgaaaccccgctgatcctgccgacggtggactaccaggccgtggcctcggtggtc
gccgactggaccggcatcccggtgggccgcatggcgcgcaatgagctggagacggtgctc
aacctcgaccagcacctgaagaaacgcatcatcggccaggaccacgccctgcagatgatc
gccaagcgcatccagacgtcccgcgccggtctcgacaacccgagcaagccgattggcgtg
ttcatgctggccggcacctcgggcgtgggcaagaccgaaaccgccctggccctggccgaa
gccatgtacggcggcgagcagaacgtcatcaccatcaacatgagcgaattccaggaagcc
cacacggtgtcgaccctcaagggcgcgcctccgggctatatcggctacggcgaaggcggc
gtgctgaccgaagccgtgcggcgcaaaccctacagcgtggtactgctggacgaggtggag
aaagcccacccggacgtgcatgaaatcttcttccaggtgttcgacaagggcgtgatggaa
gacggcgaaggccgggtgatcgacttcaagaacaccctgatcctgctgaccaccaacgcc
ggtaccgagctgatttcccaggtgtgcaaagacccggcgaacatccctgagccggaagaa
atcgccaaggccctgcgccagccgctgctggagatctttccgccggcactgctcggccgc
ctagtgaccattccgtactacccgctgagcgatgagatgctcaaggcgatcacccgcctg
caactgggtcgcatcaagaagcgcgtggagacgacccacaaggttgccttcgactacgac
gacgcggtggtcgacctgatcgtctcgcgttgcaccgaaaccgaaagcggcgggcgcatg
atcgacaccattcttaccaacagcctgctgccggacatgagccgtgagttcctcacgcgc
atgctcgaaggcaaggcgatggcgggtgtacgcatcagcagccgggataatgaattgcac
tacgacttcagcgacgcagattga
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