Pseudomonas fluorescens SBW25: PFLU_6074
Help
Entry
PFLU_6074 CDS
T00899
Name
(GenBank) Putative sensory box/GGDEF family protein
Organism
pfs
Pseudomonas fluorescens SBW25
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
PAS_8
DUF2070
PAS_PdeA
MASE5
CREPT
Motif
Other DBs
NCBI-ProteinID:
CAI2800199
UniProt:
C3K4G0
LinkDB
All DBs
Position
1:complement(6648402..6651329)
Genome browser
AA seq
975 aa
AA seq
DB search
MCMLRRRFGLTIIRTLPMTLSTDLFGPSAAPAQVLRKHYATEMAVERTRLLYQGSLLPTL
LMLVNGLVCAWLLWNPKQYLLDSIWLVWLLALVAMRVIQVAAFDSAMPSRQAQPVWRRMF
MLGSAVSGLTLATAAIALVPADSFMQQAWVFGLIGAATLSASVAYAVSVPAFLSFALPCL
VPSIIYLFWSGDPQQRGWGVLGLILLASLSLVAWQVNRLIQRGLLRRFQNQALIEHLQQA
QQRSEQLNQELVREVEQRRQVEQELREAQVGLQDRVAQRSQELDAASLALNKSEARLAMA
LQASELGLWDWNLQTDEVHHTQLKELFGLEPEYVTAMLGHLKPRLHPEDLPLLKRALVEH
LKGRSEDYQVEYRVRHGDGHWVWIEDRGRAVERAPSGRVTRMLGTRRDISASKALEEQQR
LASTVFEAASEGIVILDPDYVLIAVNQAFSRVTGFETDDMIGRNVVELPSSRDARRHFPV
IRQALLSHGTWQGELVETRKNGELYPQWLQLNVVRDVRGKVSHIVGFFADLSARRESEER
MRYLTHYDELTGLANRSLFRERLREAHQRVRQGGRSLALLHINLDRFKLLNDSLGHEVAD
QLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLLAKLRVPVTVEG
HELVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFYTDSLQASTLERLQL
ENHLRKAIEERQLSVFYQPKLCLATGKLNAAEALIRWEHPQWGMVPPGDFIGLAEETGLI
VPLGEFVLREACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETGLDPQYL
ELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQTFI
RGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRGERCDEVQGYLISRPMQA
EGLADLLRKNADFPE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtatgctccgtcgacgtttcgggctcaccattataagaacactgcctatgaccctc
agcaccgacctgtttggcccctcggcggcgcccgcgcaggttcttcgcaaacactacgcc
actgagatggcggtcgagcgcacacgcctgctgtatcagggctcgctgctgccgaccctg
ttgatgttggtcaatggcctggtctgcgcctggctgctctggaatcccaagcaatacctg
ttggacagcatctggttggtctggctgctggccctggtggcgatgcgcgtgatccaagtg
gccgcgtttgattcggctatgcccagtcgccaggcccagccggtgtggcggcgcatgttc
atgctcggttcggcggtcagcggcctgaccctggccaccgccgccatcgccctggtgccg
gcggacagctttatgcagcaggcctgggtgttcggcctgatcggcgccgcgacactgtcg
gccagcgtggcctacgccgtgagcgtgccggcctttttgtcgttcgccttgccgtgcctg
gtgccgtccatcatttatctgttctggagcggtgacccgcagcagcgtggctggggcgta
ctcggcctgatcctgctggcgtccttgagcctggtggcgtggcaggtcaatcgcctgatc
cagcgcgggctgctgcgacgcttccagaaccaggcgttgatcgagcatctgcaacaggca
cagcagcgcagcgagcaactcaatcaggagttggtgcgcgaagtcgaacaacgccgccag
gtcgagcaggaactgcgcgaagctcaggtcggcctgcaggaccgcgtggcacagcgcagc
caggagctggacgctgccagcctggcgctgaataaaagcgaggcgcgcctggccatggcc
ctgcaagccagcgagctgggcctgtgggactggaacctgcaaaccgacgaagtccaccac
acccagctcaaggagctgttcggcctggagcctgagtacgtcacggcgatgctcggtcac
ctcaagccacgcctgcaccccgaagacctgccgctgctcaagcgtgccctggtggagcac
ctcaagggccgcagcgaggactaccaagtggaataccgcgtgcgtcatggcgatgggcat
tgggtgtggatcgaagaccgtggccgtgccgtggagcgtgcgcccagcggccgcgtcacg
cgcatgctcggtacacgccgtgatatcagcgccagcaaggccctggaggaacagcagcgt
ttggcgtcgaccgtctttgaagccgccagcgagggcattgtgatcctcgacccggactac
gtgctgattgccgtcaaccaggccttcagccgtgtcacgggctttgaaactgacgacatg
attggccgcaatgtggtggagctgcccagcagccgcgatgcccgccgccactttccggtg
atccgccaggcgttgctaagccacggtacgtggcagggcgagttggtggagacgcgcaag
aacggcgagctgtacccgcagtggctgcaattgaatgtggtgcgcgatgttcgaggaaaa
gtcagtcatatcgtggggttcttcgccgatctctcggcgcggcgtgagtccgaagaacgt
atgcgttacctcactcattacgacgagttgaccgggctggccaaccgctcgctgttccgc
gaacggctgcgcgaggctcaccagcgtgtacgccaaggtgggcgcagcctggcgctgctg
cacatcaatctcgatcgcttcaagttactcaatgacagcctcggccatgaagttgccgac
caattgctgcaaaaaatggcgcgtcgcctgattaacgctttgcccgaggccgacaccatt
gcgcgtttgtccggggatgaattcgctgtgttgttcgacgcctatggcaacctgtcgagc
ctggcgcgcgtggccacgcggctgctggccaaactgcgggtgccggtgacggtggaaggg
catgagttggtggtcagtgcctcaatgggtgtcagcctgttaccggacaatgcgcgggag
atttccgcgctggtcagtcaatcgaacatggccatgcagcacgccaagcacttgggcggc
aataactttcagttctacaccgacagcttgcaagccagcaccctggagcgcttgcagctg
gaaaaccacctgcgcaaggccatcgaagaacgtcagctctcagtgttctaccaaccgaag
ctatgcctggccaccggcaagctgaatgcggccgaggcgttgatccgctgggagcatccg
caatggggcatggtgccgccgggggattttatcggcctggccgaagagactggcctcatc
gtgccgctgggcgaattcgtgctgcgcgaggcgtgctggcaggcgtgtgaatggcagcgt
caggggctggcgccgattcgcgtgtcggtgaacctctcggtgcaccaactgcgtcaaggc
aagttggtcagcctggtgcgccaagtgcttgaagaaaccggcctggacccgcaatacctc
gagctggagctgaccgaaagccaattactcgacagcgtcgaacacatcatcgccacgttc
cagcaactgcgcgacctgggcgtgaagctggccatcgacgatttcggcaccggttattcg
tccctcagctacctcaagcgtatccccgtggactacgtgaagatcgaccagacctttatt
cgtggactcgggcaggggcgtgaagacgcggccatcacccgcgcaattatcgccatggcc
catgggctggcactcaaggtggtggcagaaggtgtggaagaccagcagcagctggatttc
ctgcgcggtgagcggtgtgacgaagtgcagggctatttgatcagccggccaatgcaggcc
gaagggttggcagatttgttacggaaaaatgcagattttcctgagtga
DBGET
integrated database retrieval system
