Pelosinus fermentans: JBW_00935
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Entry
JBW_00935 CDS
T03813
Name
(GenBank) sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pft
Pelosinus fermentans
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pft03000
]
JBW_00935
Transcription factors [BR:
pft03000
]
Prokaryotic type
Helix-turn-helix
Other families
JBW_00935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
Mg_chelatase
HTH_7
AAA_5
AAA
HTH_50
PAS_4
AAA_2
PAS_9
PAS
HTH_23
PAS_8
HTH_38
HTH_22
HTH_29
PAS_GdpP
HTH_28
AAA_3
PF0610-like_N
IstB_IS21
HTH_Tnp_ISL3
Diguanyl_cycl_sensor
DUF815
ATPase
AAA_16
TrmB
HTH_30
IclR_C
HTH_11
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AJQ26287
UniProt:
I9DIG6
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All DBs
Position
1149693..1151693
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AA seq
666 aa
AA seq
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MDMNVLGEPVGHNMGIAWNQFIRSGKIAAGIVSPLVAKSWEKCANRNMNPTEGRGQIELG
HNELKELLDKNERTIRIANPFMKNLYKTFSNTGFIIVLADIKGYILESFGDKERLKNAQY
LNFVLGANWSEASVGTNAIGLALATGKPAQVSGWEHFSQPHHCWTCSAAPIFNRQGEMVA
VLDISGPVHEKNSHTLGMVAAASEAISMQLKMQQKQNEMVLVNKHLESIFNAMSDGVILI
DKCGIIKDVNTITKQMLNRNNQNMIGCSIDTIFKEISPFTKEMLHHKKSYSGIKLSVPGS
NGTNHCLASGEIVADDQGSVSGGVVILRPIQQGKSSANCYSAHNADFTFNDIIGTSSSMR
EVMGVAVLAAESTSNILLQGESGTGKELFAQAIHNQSARRKGPFIAVNCGAIPRELIGSE
LFGYEEGAFTGAKRGGRPGKFELAAGGTLFLDEIGDMPLEQQVSLLRVLQEKKINRIGSD
KIIATNVRIICATNKNLLKEVRMGSFRQDLYYRLNVISVTIPPLRERGEDIILLLTSFLQ
NLSKGGNCEFDLEPEVLHCLKKYSWPGNVRELHNVAERIIHLVKGKTVSLVHLPADVYHC
CEELTELPTQRSSFKEQRKRENEKTEREEIITLLHECKGNISHIAKRMGVARTTVYRKMQ
LYAIQY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaatgttctcggtgagcccgttggtcataatatggggatagcttggaatcaa
tttattcgttcaggaaaaatcgcagcaggaattgtttcgcctttggttgctaagtcatgg
gagaaatgtgccaatcgaaacatgaaccctacagaaggtcgagggcaaattgaattaggg
cataatgagcttaaagagctgctagataagaacgaaaggacgattcgtattgccaatcct
tttatgaaaaatctttataaaacgttttccaatacgggattcattatcgtattggcggat
attaaaggatatatattagaatcttttggtgataaggaacgtttaaagaatgcacaatat
cttaactttgttcttggagctaattggtcagaggcaagcgtggggacaaatgcaattgga
cttgcgttagctacgggaaagccggctcaagtctcaggctgggagcatttttcacaaccg
catcactgctggacttgttcggcagcccccatttttaatagacaaggagaaatggttgcc
gtactagatatttccgggcctgtacatgagaaaaattctcatactctgggcatggtggcc
gcggcttcagaggcaatttccatgcagctaaaaatgcagcagaaacaaaatgaaatggtt
ttagtgaataaacatttggaaagtatttttaatgctatgtcagacggtgtgatcctcatt
gataaatgtggcattattaaagacgtaaatactattacgaaacaaatgctcaatcgcaat
aaccaaaacatgatcggctgttcgattgatactatttttaaagaaatatcacctttcacg
aaagagatgctgcaccataagaaatcgtattctggtattaagctatcagtgcctggttct
aatggaacgaatcattgtttggcttcaggtgaaattgttgctgatgatcagggaagcgtg
agcggtggtgtagtgatcttgcgtccgattcaacaaggcaagagttctgcaaattgctat
agtgcccataatgcggatttcacatttaatgatattattggtactagttcttctatgcgt
gaagtgatgggagtggcagtattagcggctgaaagtacttcaaacatacttctgcaaggg
gaaagcgggactggaaaggaattatttgctcaggcgattcataaccaaagtgctagacgt
aagggaccatttattgctgtgaattgtggtgcaataccccgagaattgattggcagcgaa
cttttcggctatgaagaaggggcttttacaggagccaagcgaggggggcgtccaggaaag
tttgaattggcggcaggtgggacgctattcttggatgaaattggtgacatgcctttagaa
cagcaagtctccttactgcgggtactgcaagaaaaaaagataaatcgcattggcagtgat
aaaataattgctacaaatgtacgaatcatttgtgctacaaataaaaatctgctgaaagaa
gtgagaatggggagctttaggcaagatctttattatcgcctcaatgtaatctctgttacc
atacctcctttgcgtgaacggggagaagatatcatcttactgcttacttcctttttgcaa
aatttgagcaaaggcggaaattgcgaatttgacctagagccggaagtactgcattgctta
aaaaaatatagctggccggggaatgtgcgcgaacttcataatgtagcagaacgaatcatc
catctggttaagggaaagacagtatcgttagtacatttgcctgccgatgtatatcattgc
tgcgaagagttgactgaactgccaacccaaagaagttcttttaaggaacagcgcaagcgg
gagaatgaaaaaacagaacgagaagaaatcattacactgctccatgagtgcaaaggaaat
attagtcatattgccaaacgaatgggcgtagctcgtaccacagtttatcgaaagatgcaa
ttgtatgcaatacaatattaa
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