Pelosinus fermentans: JBW_01741
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Entry
JBW_01741 CDS
T03813
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pft
Pelosinus fermentans
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pft03019
]
JBW_01741
03009 Ribosome biogenesis [BR:
pft03009
]
JBW_01741
Messenger RNA biogenesis [BR:
pft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JBW_01741
Ribosome biogenesis [BR:
pft03009
]
Prokaryotic type
rRNA processing factors
JBW_01741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
TcdA_TcdB
DUF3895
Motif
Other DBs
NCBI-ProteinID:
AJQ27091
UniProt:
I9DCR6
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All DBs
Position
2038570..2040024
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AA seq
484 aa
AA seq
DB search
MGKIIVVNMTPEETRMAILEDKELIEVSIERTKSGHSVGNIYKGKTKNVLPGMQAAFIDI
GREKNAFLYIGDALPQGAAQALADTALTVGKDVMVQIVKDAIGTKGPRATTHLTLPGRYV
VLMPTVDYIATSRRIGNEEERIRLKKIIEKVRPEGMGVIVRTMSEGKSEEDLQKDIEYLY
NLWKALVARSKRAAAPILLYRDVDLVIRIVRDYLADDVETFILDNQDAYGRVCDLLNYMS
PELVSRVTLYQGKEDIFTHFGIDEELKKIGQRSIWLACGGYIVIDKTEALTVIDVNTGKF
VGSTNLSDTVFRTNLEAASEIVRQIRLRDIGGIIIIDFIDMDKEEQKQAVLAALAEEFKR
DRTKTNILGFTVLGLVQITRKKVRQNVEGMLYNECPCCEGRGRVQSPETVMINIWRKMRY
IMSQPRRQGRLVIQVHPLVAEMIKSQGELTRMEHELACSLRIEALAEMNPEMFSILHESD
PLGK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaataattgtggtgaatatgacaccagaagaaacaagaatggcaattctggaa
gataaagaattgattgaagtatccatagaacgaactaaaagtggtcacagtgttggcaat
atatataaagggaaaacaaagaatgtacttcctggtatgcaagcggcatttattgatatt
gggagagaaaaaaatgcttttttatatattggcgatgcattgcctcagggggctgctcag
gcgcttgctgatactgccttaactgtgggcaaagacgttatggttcaaattgtaaaggat
gcaattggcactaaaggacctcgggcgactacacacttaaccttgccaggacgatatgtc
gtattaatgcctaccgtcgattatattgcgacttcaagacgtatagggaatgaagaagaa
cggatacggctaaaaaaaattattgagaaagtgcggccggaaggtatgggggtcattgtt
cgtaccatgtctgaaggtaaaagtgaagaggatctacaaaaagatatagagtatctttac
aacctatggaaggcactcgtcgctagaagtaaaagagcagctgcgccaatcttgctgtat
cgtgatgtggatttggtaattcgtatcgtacgtgattacttagcagatgatgtagaaaca
tttattttggataaccaagatgcctatgggcgagtttgtgacttgcttaactatatgtct
ccagagctggtgagcagagttaccctctatcaagggaaagaagatatttttactcatttt
gggattgatgaagaattaaagaaaattggccagcgttctatttggcttgcatgcggtgga
tatattgtaattgataaaacagaagcgctaacggttattgacgtgaatacaggaaagttt
gtcgggtctactaatttatcagataccgtttttcgaaccaatttagaagcagcaagcgaa
attgttagacaaatacgtttgcgagatattggcggcattatcattattgattttatcgat
atggataaagaagaacagaaacaggcagtattagccgcactagcagaagaatttaaacgt
gatcgtacaaaaaccaatatacttggttttactgtcttgggcttagtacagattacacga
aaaaaagttcggcaaaatgtagaagggatgctttataatgaatgtccatgctgcgaagga
cgtggcagggtacagtcccctgaaacagtaatgattaacatctggcgcaagatgcgctat
atcatgagtcaacccaggcggcagggacgtcttgtcattcaagtgcatcctcttgttgcg
gaaatgattaaaagtcaaggcgagttaacccgtatggaacacgaactggcttgttcatta
cgtatagaagcgttggctgaaatgaatcctgaaatgttttccatcttgcatgaaagtgat
cctttaggaaaataa
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