Pelosinus fermentans: JBW_01994
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Entry
JBW_01994 CDS
T03813
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pft
Pelosinus fermentans
Pathway
pft02020
Two-component system
pft02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JBW_01994
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JBW_01994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pft03021
]
JBW_01994
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pft02035
]
JBW_01994
Transcription machinery [BR:
pft03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JBW_01994
Bacterial motility proteins [BR:
pft02035
]
Flagellar system
Flagellar assembly proteins
Stator
JBW_01994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
GerE
capSnatchArena
CT_C_D
PhaP_Bmeg
HTH_Tnp_Tc5
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AJQ27344
UniProt:
I8U0D9
LinkDB
All DBs
Position
2302126..2302884
Genome browser
AA seq
252 aa
AA seq
DB search
MLDNKQAKIEEIMKLWLEYQQSRKVEIREKLIEYYLSLVKLVASRIAISLPQYVDKDDLI
SNGFFGLLDAIEKYDPMRGIKFETYAVVRIRGSMLDAIRAQDWVPTSIRQKAKQYEQTVS
KLENQLGRAATDSEIAEALSISVNELYVLLNQLNASTIMPLDEFIKTETSSAHLTNPSEQ
IEIEEVKQALAKTIDKLPEKERLVVSLYYYEGLTLKEISLILKLSEARISQLHTKSIFRL
RGALSRIKSSFI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgttagataataagcaagctaaaatagaagaaattatgaaattgtggctagaatatcag
caaagtaggaaagtggaaatacgagaaaagctgattgaatactacttatcgttagttaag
ttagttgcgagtcgcattgcgattagcttaccacaatatgtagataaagacgatttaatt
agtaatggtttttttggtttacttgatgcaattgaaaaatatgatccgatgcggggaatt
aagtttgaaacttatgccgttgttcgtattcggggttctatgcttgatgccattcgtgca
caagattgggtaccaaccagtatccgccaaaaggcaaaacaatatgaacaaacggtatca
aagcttgaaaatcaattagggcgtgctgcgactgatagtgagattgctgaagctcttagt
atttcagtcaatgaactatatgttctattaaatcagctcaatgctagtacaatcatgcct
ttagatgaatttataaaaacagaaacctcttctgcgcacctaacgaacccgtcagagcaa
attgaaatagaagaagtaaagcaagccttagccaaaacaatcgataaattacctgaaaaa
gaaagattagttgtttctttgtattattatgaaggattaaccttaaaagagatcagttta
attttgaaattgtctgaagcgcgtatttctcagctgcacactaaatcaattttccgatta
agaggagcattatcacggattaaatcaagttttatttga
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