Pelosinus fermentans: JBW_02076
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Entry
JBW_02076 CDS
T03813
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pft
Pelosinus fermentans
Pathway
pft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JBW_02076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_02076
Enzymes [BR:
pft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JBW_02076
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JBW_02076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
TrwB_AAD_bind
PIF1
SLFN-g3_helicase
AAA_30
AAA_16
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJQ27426
UniProt:
I9NXA4
LinkDB
All DBs
Position
2380761..2383193
Genome browser
AA seq
810 aa
AA seq
DB search
MQRIAQVLINITTKNINKAFSYSIPEHLDYVDVGWRVLVPFGNRKLEGFIIDIIIEEDSN
SIELKSIIDILDNDKWFDEHMMHTARWISEYYLCNLVDAMRLFIPGKSGVKSVVAYSIEM
EVDTETTLVALSAKYPEYSQVLSYIEMHSPILSVKLEKKFGPSVLKAIRYLVRNKIIVAE
SIAKKMGTHRYKTVMSLLMDAEATREQINKLAKKPAQCRLLQYLIDHGQLASDELKKSNT
SHDTVKKLVQDGLIKLEKVQVVRDSYADICKVRNNISLTVEQQQALEKIMPKMEAKEFQS
FLLHGITGSGKTQVYIEAVAAARQKNRQAIVLVPEIALTSQIVSRFKARFGDDVVVMHSK
LSTGERYDAWQRLRGKQAGIVIGARSAIFAPLPDLGIIIMDEEHEFTYKQEETPRYHTRQ
VAITRATLSGAVVIMGSATPAIETYFQTQMSQHTLLLMSKRIANANLPAVTIVDMREELR
KKRRSIISLPLQELLQETISRGEQAIILLNRRGYATFVMCRECGHIVRCKHCDISLVYHS
VGKKLKCHYCQCIETVPDICPECNSRYIRFFGTGTQKLQEEIVTLFPHIRVVRMDQDTTG
GRMAYDRILEAFAKGEYDLLLGTQMVAKGHDVKNVTAVGIIAADSILNLPDFRAAERVYA
LLTQAAGRAGRGDKAGKVVVQTYNPEHYAVQAGANQDYQSFYEAEIVYRKALCYPPYGQI
IKLTVQAKEESMARSQADQIIKELRSLMAESKTVEIIGPFPAPIAKVNDIFRMNIIIKAK
DLTSMRTHITSTGLTIRPDVMIDVEPVSIM
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtattgctcaagttttaataaacattacaactaaaaatattaataaagctttt
tcttatagcattcctgaacatttggattatgttgatgtaggatggcgtgttttagtacct
tttggtaatcgtaaattagaaggttttattattgatattataatagaggaagactcgaat
agtattgagttaaagtcaattatcgatatactagataatgacaaatggtttgatgagcat
atgatgcatacagctagatggattagtgaatattatctttgtaatttagtagatgccatg
cgtttatttattccaggaaaatcgggtgtgaaaagtgttgttgcttattctatcgagatg
gaagtggacacagaaacaacactagttgccttatctgctaaatatccagaatatagccaa
gtactgtcatatatagagatgcacagccctattctttccgttaagctggaaaagaaattt
ggcccaagcgttttaaaagcgataagatacttagtgaggaataagatcatagtcgctgaa
tcaattgccaaaaaaatgggtacacaccgttataaaacggtaatgagtttactaatggat
gccgaagcaactcgagagcaaattaacaagttggcaaaaaagccagcacaatgccgtttg
ctgcaatacttgatagatcacgggcaattggcatctgatgaattgaaaaagagtaatacc
agccatgacactgtaaaaaaattagtacaggacggtcttataaaacttgaaaaagttcaa
gtggtacgtgatagttatgcggatatatgtaaagtaaggaataatatatcattaacagta
gagcagcagcaagcattagaaaaaattatgccaaagatggaagcaaaggagtttcaatcg
tttttactgcatggtattactggcagtggaaagacacaggtgtatattgaagcggtagcg
gctgcgcgtcaaaagaatcgccaagccattgttcttgttcctgagattgctcttactagc
caaattgtctcaagatttaaagctagatttggtgatgatgttgttgtaatgcatagtaaa
ttgtctactggcgaacgttatgatgcttggcagcgacttcgaggcaagcaagctggtatt
gtaattggtgcacgttctgccatttttgcgcccttgccagatctcggtattattattatg
gatgaagaacatgaatttacgtacaaacaagaagaaacacctcgttatcatacaagacaa
gtcgctattacaagagcgactttgtctggagcggtggtcattatgggcagcgctacgcca
gcaattgagacttattttcagactcaaatgagtcaacataccttgttgcttatgtcaaag
cgcattgctaatgcaaatttgcctgcagtcactatcgttgatatgcgggaagaattgcgt
aagaagagacgaagtatcatatcacttcccttacaagaactgctgcaagagactataagt
cgtggagaacaagctattattttactgaatcgtcgtggttatgctaccttcgtcatgtgt
cgggaatgtggacatattgtacgttgtaagcattgcgatatttctcttgtgtatcattct
gtagggaagaagctgaagtgtcactattgtcagtgtattgaaacggttccggatatttgc
cctgaatgtaatagccgctatattcggttttttggaaccggcacacaaaagctacaagag
gaaatagtaacattgtttccccatattcgtgtagtgcgaatggatcaggatacaacaggt
ggaagaatggcctatgatcgtattttagaggcatttgctaaaggagaatatgatctttta
ctggggacacagatggtggctaaagggcatgacgtgaaaaacgtgacggccgttggcata
atagcagctgatagtatcttaaatttaccggattttagagcagcggagcgtgtatatgcg
ttgctaactcaggcagcaggtcgtgcaggtcgcggtgataaagcaggaaaagtcgtagta
cagacgtataatcctgaacactatgcagtacaggcaggagctaatcaggattatcaaagt
ttttatgaagctgagattgtgtatcgtaaagcgctttgttatccaccttatggacaaatc
ataaaattaactgttcaggctaaagaagaaagtatggctcgcagccaggctgatcaaata
atcaaagaattgcgaagtttaatggcggaaagtaagactgtagaaataatagggccgttt
cccgctccgattgctaaagtcaatgatatatttcgtatgaacattattataaaagcaaag
gatctcactagtatgaggactcacataacatctacgggattaaccatacgtccagatgtt
atgattgatgtggaacctgttagtatcatgtag
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