Pelosinus fermentans: JBW_02335
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Entry
JBW_02335 CDS
T03813
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pft
Pelosinus fermentans
Pathway
pft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JBW_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pft03019
]
JBW_02335
03016 Transfer RNA biogenesis [BR:
pft03016
]
JBW_02335
Enzymes [BR:
pft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JBW_02335
Messenger RNA biogenesis [BR:
pft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JBW_02335
Transfer RNA biogenesis [BR:
pft03016
]
Prokaryotic type
tRNA degradation factors
JBW_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AJQ27681
UniProt:
I9DGZ7
LinkDB
All DBs
Position
complement(2620512..2622605)
Genome browser
AA seq
697 aa
AA seq
DB search
MYKIEMQLGDRPLIIESGRMAKQAGGSVFVRYGDTAVLVTATASAEPRDGIDFFPLTVDY
EEKLYSVGKIPGGFIKREGRPSESSILASRLIDRPIRPLFASGFRNDVQIVATVLSVDQD
NSPEIPAMIGASCALSISDIPFNGPIGGVRVGLINNEFITNPTVEQQKLSELNLVVAGTK
DAVLMVEANANELSEDTILQAISFGHDIIRNLIAIQEKMIVEIGKPKREIKLYEIPAEIS
SAIRDYATEKLTTAVRNSDKLTREENIKQAKKQVAEHFEAIYPDNGKDIQNMMQKIIKEA
VRRMITVDKIRPDGRQLEEVRPISCDIGLLARTHGSALFTRGQTQALTITTLGAMGDEQI
LDGLGVEESKRYMHHYNFPSFSVGETRPSRGPGRREIGHGALAERALVPVIPSEIEFPYT
IRLVSEILESNGSSSMASVCGSTLSLLDAGVPIKRPVSGVAMGLVKEGEDFSILTDIQGL
EDALGDMDFKVAGTTSGITAIQMDIKIAGITEEILSAALSQAHRGRMHIMSKIVEVIQEP
RAELSPFAPRIITMEIHPDKIRDVIGPGGKTIKKIIEETGVKIDIEDDGKVFIAAVDMEA
GQKAVKIIETLVREVEVGSSYTGKVTRLMNFGAFVEILPGKEGLVHISQLARERVEKVED
VVKVGDEILVKVTEVDRQGRINLSRKELLPVESEKKE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatcgaaatgcaacttggagatagacccctgattatagaatcaggcagaatg
gccaaacaagctggtggatcagtgttcgtcagatatggagatactgcagtattagtaact
gctacagcatcagcagaaccaagggatggtattgattttttcccactgacagttgattat
gaagaaaaattatattcggtaggtaaaattccgggtggctttattaaacgtgagggacgt
cccagtgaatcctctattcttgcaagccgtttgatcgatagacccattcgaccattattt
gctagcggttttcgcaatgatgtacaaatcgtagcgaccgtattatcagtcgaccaggat
aattcaccagaaatacctgcgatgatcggcgcatcatgtgctttatcaatttcagatatt
ccatttaacggaccaattggcggcgtcagagttggtttgattaataatgaattcattacg
aatccaactgttgagcagcaaaaattaagtgaacttaatttagtcgtcgcaggtacaaaa
gatgctgtacttatggtagaagccaatgctaacgaattaagcgaagatactatcttacaa
gcaattagctttggacatgacatcattcgtaatctaattgctatccaagaaaaaatgatt
gttgaaattggtaaacctaaacgtgaaataaaactatatgaaatacctgctgagatcagt
agtgccatacgtgattatgctacagaaaaacttacaacggcagttagaaattctgataaa
ttaacccgagaagaaaatataaaacaagctaagaagcaagttgcagaacatttcgaggct
atatatcctgataatggtaaagacattcaaaatatgatgcaaaaaattattaaagaagca
gttcgtagaatgataactgttgataaaatacgtccagatggtcgtcaattagaagaagta
cgacctattagttgtgacattggtttgttagcacgtacacatggttctgccttatttact
cgtggacaaacccaagcattgacgatcacaactcttggtgcaatgggagacgaacaaata
cttgatggcttaggtgtcgaagaatcgaaacgttatatgcatcattataatttcccatca
tttagcgttggtgaaacaagaccatcaagaggaccaggacgaagagaaattggtcatggt
gccttagcagagcgtgcattagttccagttattccttcagaaattgaatttccttataca
attcgcttggtttcggaaattttagaatcaaatggttctagttccatggctagtgtctgc
ggcagtaccttatctcttcttgatgcaggtgtaccgattaaacgcccagtatctggagtt
gctatgggtttagttaaagagggagaagatttttctatactaactgatatccagggctta
gaagatgcattaggcgacatggattttaaagttgctggtacaacatctggcattacagcc
attcaaatggatattaaaattgctggtattacagaagaaatcttatctgcagcgctttct
caagctcatcgcggcagaatgcacatcatgagtaaaattgtagaagtgattcaggaacct
agggctgagttgtcgccttttgcgcctcgtattattacaatggaaattcatccagataag
attcgagatgtaattggacctggtggtaaaacaattaaaaaaattatcgaagaaactggt
gttaaaattgacattgaagatgacgggaaagtatttattgctgctgtagatatggaagca
ggacaaaaagctgtaaaaatcattgaaacgctggttagagaagtagaagtaggcagctct
tatacgggcaaagttacacgtttaatgaattttggtgcttttgtcgagattctcccaggt
aaagaaggacttgtccacatctctcaattagctcgtgaacgagtggaaaaggtagaagat
gttgtaaaagttggagacgaaattctagttaaagttacagaagtggatcgccaaggacgt
attaacctttcacgtaaagagcttttacctgtggaatctgaaaaaaaagaataa
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