Pelosinus fermentans: JBW_02386
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Entry
JBW_02386 CDS
T03813
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
pft
Pelosinus fermentans
Pathway
pft00900
Terpenoid backbone biosynthesis
pft01100
Metabolic pathways
pft01110
Biosynthesis of secondary metabolites
pft03010
Ribosome
Module
pft_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JBW_02386
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
JBW_02386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pft03011
]
JBW_02386
Enzymes [BR:
pft01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
JBW_02386
Ribosome [BR:
pft03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
JBW_02386
Bacteria
JBW_02386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
DUF7432
SpoU_sub_bind
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
AJQ27731
UniProt:
I8U4A7
LinkDB
All DBs
Position
complement(2674670..2676637)
Genome browser
AA seq
655 aa
AA seq
DB search
MKIIAAEHQGFCYGVKRAVAMAQECIGMEGNIHTLGPIIHNPQVVKRFSDKGIEVVNDLS
SVDDESTVIIRSHGVGPDIYAKAQTKKLTVVDATCPHVKKAQQAAYELLQDGFAVVIVGE
KHHPEVKSILEWSNNQGIVVETVEEAMRLPLIPKLGVVVQTTFSGEVFQTIVNVLQTKCN
EMQIRRTICTATDLRQQSALDIAAKVDVMLVIGGKNSANTSRLAQLCHDAGSRVYHIETA
AELRVEDFSGVETVGITAGASTPDWLIEEVYQKMQEFNQLLDNEVIKLEQGSIVKGKIVG
IRKDEVFVDIGYKGEGSISLAELAYPAPENAAEVVSEGQIIDVLVLDLESNDGIKLSKVK
ADAIVAWDVLEEALENKKQVEAKVLEVVNGGLKVSVLGIHGFVPASQVELRFVEDLSPFK
GQTLTFQPIEVDRIKKRVILSRKVILQEQRRILEEETFSKLAVGQIVSGTVRRIVDFGAF
IDIGGIDGLVHISDLSWHRVKSPQEIVALGDQVKVLILKIDNEAKKISLSLKEVGRDPWL
DLIEQYSVGAIVKGKVTKITKFGAFIELVPGIEGLVHMSELSDERVNKVEDVVAVGQEVT
VKILEISKENKRISLSISKAQQDAERVEYQSYLDKQEGTGSTIGDKLGHLFKKFE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattgcggctgaacaccaaggtttttgttatggtgttaaacgcgcagtggca
atggctcaagaatgtataggtatggaaggcaatatacatactttgggacccattattcat
aatccacaagtagttaagcgcttttcagataaaggtattgaagtagtaaacgacttatct
tctgttgatgatgaaagtacagtgattatacgttctcatggagtaggtcctgacatatat
gcgaaagcccagactaaaaagttaacggttgttgatgctacttgtccccatgtgaaaaaa
gcacaacaagcagcttatgagttattacaggatggttttgctgtagtaatcgttggtgag
aaacaccatccagaagtaaagagtattttagaatggtcaaacaaccagggaatcgtagtc
gaaacagtcgaagaagcaatgcggttacctcttataccgaaattaggtgtagtggtacaa
actactttttctggagaagtttttcaaactatagttaatgtattgcaaacgaaatgcaac
gaaatgcaaattcgtcgcacaatctgcactgcaactgatcttagacaacaatcagcatta
gatatcgcagcaaaagtagatgtaatgttggtaattggtggtaaaaatagtgcaaatact
tcaaggctagctcaattatgtcatgatgctggtagccgggtatatcacatagaaacagct
gcggagttgagagttgaagatttttctggggtagaaactgttggaattacagcaggtgca
tccactccagattggttaatagaggaggtttatcaaaaaatgcaagaattcaatcaattg
ttagacaatgaagtaatcaaacttgaacaaggcagtattgtcaaaggtaaaatcgtaggt
attcgtaaagatgaggtttttgttgacattggctataaaggagaaggaagcatatcctta
gctgaattagcatatccagcaccagagaatgccgcagaagtagtaagcgaggggcaaatc
attgacgtgcttgtattagatttagagagcaatgatggtataaaactgtctaaggtaaaa
gctgatgcaatagtagcatgggacgtattagaagaagccttagagaataaaaaacaagtt
gaagctaaggttttggaagttgtaaatggtggtttaaaggtttctgttttgggaattcat
ggttttgttcctgcgtctcaagtagaattacgctttgtagaagatttatcaccttttaaa
ggtcaaacattaacttttcaaccgattgaagttgatcgtataaaaaaacgagtaattttg
tctcgtaaggttatattgcaagaacagcgccgcatccttgaagaagaaaccttttcaaag
ttagccgtgggacaaattgtatcaggaacggtacgacgtattgttgattttggtgctttt
attgatatcggtggtattgatgggttagtgcatatctcagatttatcatggcaccgtgta
aaaagccctcaggaaattgtagctctaggagatcaggtaaaggtactcattttaaaaatt
gataatgaggcaaagaaaatctcccttagcttaaaagaagttgggcgtgatccatggctg
gacttaatcgaacaatattcagtaggtgcaattgtaaaagggaaagttactaagattact
aaatttggagcatttatagaattagttccaggaatagaaggtctggttcatatgtcagaa
ctatccgatgagagagtcaataaggtcgaggatgtcgtagcagttggacaggaagtaact
gtaaaaatactggagattagtaaagaaaataagcgtatttctcttagtattagcaaagcg
caacaggatgctgagcgggtagaatatcaatcgtatttggataagcaagaaggaaccgga
tcaacaattggtgataaactcggacacctatttaagaaatttgagtag
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