Pelosinus fermentans: JBW_02772
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Entry
JBW_02772 CDS
T03813
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pft
Pelosinus fermentans
Pathway
pft03030
DNA replication
pft03430
Mismatch repair
pft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JBW_02772
03430 Mismatch repair
JBW_02772
03440 Homologous recombination
JBW_02772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pft03032
]
JBW_02772
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_02772
Enzymes [BR:
pft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JBW_02772
DNA replication proteins [BR:
pft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JBW_02772
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JBW_02772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol_E_B
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJQ28116
UniProt:
I8U3U8
LinkDB
All DBs
Position
complement(3109172..3112600)
Genome browser
AA seq
1142 aa
AA seq
DB search
MEKQPQHSNARSFVHLHVHTEYSLLDGASRIGSLVKRAKELNMPAIAITDHGTMYGIVDF
YKQAKKQGIKPIIGCEVYVAPRSRRERNMVEGEAYYHLVLLAETDEGYRNLIELVSRGNT
EGFYYKPRVDKELLSQYSKGLICLSACIAGEIPSWLLKDNITVAEALIQEYIDIFGKDNF
FLEIQDHGIPEQKKVNKLLIEMSRKFDVGLVATNDLHYINKQDAECHDVLLCIQMGKTVD
DTARMKFFSDEFYLKDFDEMAQLFGAYPEALANTCRIAERCNVTLDFGNLYLPEFPVPGG
LTANDYLEKLCRDHLKERYSEVTPEINDRLVFELGVIMKMDYSGYFLIVWDFINYARQQE
IPVGPGRGSAAGSIVAYLLGITNIDPIAYGLLFERFLNPERVTMPDIDIDFCYVNRGKII
EYVSDRYGADRVAQIITFGTMAAKGAIRDVGRALNMPYGEVDRIAKMVPNELGITLRRAL
EISSDFRAAYENEPAVGKLLDLAMAVEGLPRHASTHAAGLVISKEPLTHYVPLQNSAEGF
LTTQYDKDKVEELGLLKMDLLGLRTLTVIGDTIKLVQKSRGIKIDIDHIPLDDPKVSAML
TNGDTAGVFQLESSGITTLVKDLRPECFADLIPLVALYRPGPLGSGMVEDFINGRHGKKT
VTYVHPLLEPILCDTFGVILYQEQVMQIASVMAGFSLGQADLLRRAMGKKKHDVLDAQRE
NFLQGASERGIERKMAGEIFDLMAHFADYGFNKSHSAAYALVAYQTAYLKANYPQEFMAA
LLSSVMGTNEKIGSYIETCRQMGIDVLPPDINASQSSFSVDGNGIRFGLAAVKNVGENAI
QNMVITRDANGKFESLVDLCTKVDMRLINKRVIESLIKCGAFDSLGAKRSQLLAVLERAI
DMAAVRQRDKVSGQIGLFCEETLNDADEISLPDIPEIPKEQMLVLEKEITGFYVTGHPLD
AYREKMNSFTPLIELVTGEYGDGKNIKVAGLIISAKRITTRNGGMMCFIALEDFTEQIEV
VIFPKTFDKFNKILLPDTPVRVSGRLSMSEDKAKVIADDIQLLGDPQNLEVRLKISKVQE
SGDIFEKLKQTFSKFPGSSVVFLHLIDSRRVIKTEQQFWIRPTPEAIEALETIIGKGQVT
VA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaaccgcagcattctaatgctaggtcatttgtacatttgcatgtacataca
gaatatagcttacttgatggcgccagccgtattggaagtttggtaaaacgagcaaaggaa
ctcaatatgccagcaatcgcgattaccgatcacggcacaatgtatggtatcgttgatttt
tataagcaagcaaaaaagcaaggtattaaacccatcattggctgtgaggtctatgtggct
cctcgttcccggcgggaaagaaatatggtggaaggggaagcctattatcatttggtatta
ttggctgaaaccgatgaaggatatcgtaatttgattgagttggtatcgagaggaaatacc
gaaggtttttattataaaccgagagttgataaagaattgcttagccaatatagtaaggga
ctcatttgcctaagtgcctgcattgcaggggaaatcccttcctggctattaaaagataat
atcactgttgctgaggcgttaattcaagaatatattgacatatttggaaaagataatttt
tttcttgaaatccaagatcatgggataccagaacaaaaaaaggtaaataagcttttgatc
gaaatgtctcgtaaatttgacgttggtttagtcgcgaccaatgacttgcattatattaac
aagcaagatgcagaatgtcatgatgtgttgttatgcattcaaatggggaaaaccgtagat
gatactgctagaatgaaattcttcagtgatgaattttatttgaaagattttgatgaaatg
gcacagttatttggggcgtatccagaagcccttgccaatacttgccgcattgcagagcgt
tgtaatgtgaccttagattttggcaatttatatttgcctgaatttcctgtaccaggaggt
cttacagcaaatgactatcttgaaaagctgtgccgggatcatttgaaagagcgctacagt
gaagtcaccccagagattaatgatcgtttggtctttgagctaggcgttattatgaagatg
gattattcggggtactttttaattgtttgggattttattaattatgccagacaacaagaa
atccccgtaggaccaggccgtggatcggctgcgggtagtattgttgcatacttattgggg
attactaatattgatccgattgcttacggcttgttgtttgaacgatttttgaatcctgag
cgggttactatgcccgatattgatattgatttttgttatgtgaatcgcggcaagatcatt
gagtatgtatcggatcgttatggtgcggatcgggtagcccagattattacctttggaacg
atggctgctaaaggagctattcgagatgtagggcgagctttaaatatgccatatggtgaa
gtcgatcgaatcgctaaaatggtaccgaatgaattggggattactctgcggcgggctttg
gaaatcagttcggattttcgtgctgcttatgaaaatgaaccagcggtaggaaaattgtta
gatttagctatggcagttgaaggattgccacggcacgcttctacccatgctgcagggcta
gtgatttctaaagaacctttgacccattatgtgccgctgcaaaattctgccgaaggtttt
ttaacgacgcaatatgataaggataaagtagaagaactgggcttattaaagatggacttg
ttagggcttcgaacactaaccgttattggtgatacgattaagcttgtacagaaaagtcgg
ggcattaagattgatattgatcatatccccttagatgatcctaaagtaagtgctatgctg
accaatggtgatacagcaggtgtctttcagttagagtcaagtggtatcactactttagtg
aaggatctaagacctgaatgttttgccgatttaatacccttagtggcgctatatcgacca
ggtcctttaggaagtggcatggtagaagactttatcaatggtcggcatggtaaaaaaaca
gttacgtatgtacatcccttattagaacccattttatgtgataccttcggcgttattttg
tatcaggaacaagttatgcagattgcctcggtgatggctggtttttccttgggacaagcg
gatttgctaagacgagccatggggaaaaagaaacacgatgtactagatgcccaacgggag
aatttcttgcagggggctagtgagcggggcattgaacgaaagatggcaggggaaattttt
gatttgatggcacattttgccgattatggttttaataagtcccatagtgcggcttatgct
ttggttgcctatcaaactgcttatttaaaggcgaattatcctcaagaatttatggcagct
ttattgtcaagcgtcatgggaaccaatgagaaaattggctcttatattgagacttgccgt
caaatgggtattgatgtactgccgcctgatatcaatgccagtcaaagtagttttagtgta
gatgggaatggcatacgtttcggtttggccgcagtaaaaaacgttggcgagaatgccatc
caaaatatggtgattactcgtgatgccaatgggaaatttgagtcgctggtagatttatgt
actaaagtggatatgcgcttaattaataaacgggtaattgaaagtttaattaaatgtggt
gcatttgattcattgggagcaaagcgttcacagttgttagcagtactagaacgagcaatc
gacatggctgcagtgcgtcagcgggataaggtcagtgggcagatcggcttgttttgtgaa
gaaactttaaatgatgcagatgagattagtctgccggatattcctgagatcccaaaagaa
cagatgctggtcttggaaaaagaaatcactggcttttatgtaacgggacatcccttagat
gcgtatagagagaagatgaacagcttcactccgctaattgagttggttactggtgaatat
ggtgatggcaagaatattaaagtagcgggactcattattagtgcaaagcgcattactaca
aggaatggtggaatgatgtgttttattgctctggaggattttacagagcagatagaagtc
gtgattttcccgaaaacctttgataaatttaataaaattttattaccagatacgcctgtt
cgggtatctggcagattgagcatgagtgaggacaaggcgaaagtaattgcagatgatatt
caattacttggtgatccgcaaaatctggaagtgcggcttaaaattagtaaagtgcaagag
agtggagatatttttgaaaaattaaaacaaaccttcagcaaatttcctggctctagcgtt
gtctttttgcatctgattgatagtcgacgcgtgataaaaacagaacagcaattttggatt
aggcccactcccgaggcgatagaagcattagaaactatcattggcaaagggcaggtaaca
gttgcataa
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