Pelosinus fermentans: JBW_03260
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Entry
JBW_03260 CDS
T03813
Name
(GenBank) sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pft
Pelosinus fermentans
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pft03000
]
JBW_03260
Transcription factors [BR:
pft03000
]
Prokaryotic type
Helix-turn-helix
Other families
JBW_03260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
PAS
PAS_4
Mg_chelatase
AAA_5
HTH_30
PAS_9
AAA
HTH_50
PAS_8
TIP49
HTH_29
HTH_23
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AJQ28601
UniProt:
I9NPQ8
LinkDB
All DBs
Position
complement(3619342..3621399)
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AA seq
685 aa
AA seq
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MDVSEKEFASNYEKLQQRISTLTEAWEQFLSTGKLVSDNIISAEVLSSWTRSRNRGIDPY
NIPNVTLSEKELKERLEKNSQLIKVATPFLQAIAENVEGSGFRVDLFDADIYLLWYCGDR
KVLDDSKSHSQIKPGVCRSEATCGTNAINLAALLEKPIQLVGPEHYNVALQHWTCSAVPI
KDENGKVIAVINAAGYYWLRHTHTLGMMTALGKSIEYCLMQQSVRNELEQANNFNKEIME
SINDALIVVDANGSIMMANKVVRKSFGLGEFDSITGLAVDSLWGKNNPFSEVLKTKQPIF
DREISFTMQGRTIRLMGTIRPIGFQEKGLRCVVGTFKARSHTRGMIRNFVGWKAHFTFEN
LIGESSDFKQTLRLAKETAKMDSNVLIEGESGTGKELFAQAIHNDSGYSDGPFVVINCAA
IPNGLLESELFGYEGGAFTGAKKEGQPGKFELADRGSIFLDEINSLPIEMQAKILRTLQN
RTVIRLGGTEEIPIKVRMIAASNVDLWKMVQRKEFREDLFYRINVITINLPPLRERENDL
ELLVNNILTIKGIPTDILDESAIKVMKNYVWPGNIRELENVLERSFVFAKARGAFKIEAE
DVLNYPGIEREMKKNDAVSNKLIIPNRDEETLGLKDNEKKTILNALEASGGNISITAQML
GVARNTLYRKMKRFGIDFHDYGKTV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttggatgtttcggagaaagagtttgctagcaactacgaaaaactacagcaaagaattagc
acgttaacggaggcatgggaacaatttctttctacagggaagctggtttcagataatatt
atatctgctgaagtactaagttcatggactcggtccagaaatagaggaattgatccttat
aatatacccaatgtaacactatcagaaaaagaattaaaagagcggcttgaaaaaaatagt
caactgattaaagtagcaacaccttttttgcaagcaattgcagaaaacgtggaaggatct
ggttttagagttgatctgtttgacgcagatatttatttactgtggtactgtggcgatcga
aaggtacttgatgattccaaatcgcatagccagattaaaccaggagtatgcagaagtgaa
gctacgtgtggtacgaatgctatcaatctggcggctttacttgaaaaaccaatacaatta
gtcggaccggagcattataacgtagcattacagcattggacttgttctgctgtaccgata
aaagacgagaatggaaaagtgattgcagtaataaatgccgccggttattattggcttaga
cacactcatactcttggtatgatgacagctcttggcaaaagtatagaatattgcttaatg
cagcaatccgttagaaatgagttagagcaagcaaacaattttaacaaagaaatcatggaa
tcgataaacgatgcattgatagtggtagatgcaaatggcagtataatgatggctaataaa
gttgttcggaagtcttttgggttgggggagtttgatagtattacgggtttggcagtggac
tctttatggggaaaaaataacccgttttctgaagtcttaaaaactaagcaacctattttt
gatagagaaatttcatttactatgcaagggagaacaataagattaatgggtactatacga
ccaattggatttcaggaaaaaggattaagatgtgtcgtaggaacttttaaagctagaagt
catactcgcgggatgattaggaattttgtgggatggaaagctcattttacttttgagaac
ttgattggcgaaagtagcgattttaagcaaaccttacgtttagcaaaagagactgctaaa
atggacagcaatgtgctaattgaaggtgagagtggaaccggcaaagaattatttgctcag
gcaattcataatgatagtggatacagtgatggtccgtttgttgtaattaattgtgctgca
ataccaaatggtttgctggaaagcgaactttttggctacgaaggcggtgcttttaccgga
gctaaaaaagagggacaaccgggaaaatttgagctagctgatagagggagcattttttta
gatgaaattaattctctgcctattgaaatgcaggccaaaatactaagaactcttcaaaat
aggacagtaatacgtttgggggggacggaggagatacctataaaggttagaatgatcgcg
gcaagcaacgttgatctatggaaaatggtacagcgcaaagaatttcgtgaggatctgttc
taccgtattaatgtgataacgattaatctaccgccgctgcgggagcgagaaaatgatctt
gaactgttagtaaataacatactaacaattaaaggtataccaacggacattttggatgag
tcagccattaaagtaatgaagaattatgtttggcccgggaatattcgagagctcgaaaat
gtactagagagaagttttgtttttgccaaggcacgaggggcttttaaaatagaagctgaa
gatgtattgaattatccgggaatagaacgcgaaatgaagaaaaatgatgcagtaagcaat
aagcttatcattcccaatagggatgaagaaacgttaggtctcaaagataacgagaaaaaa
acgatattaaatgcattggaggcaagtggcggtaatattagcataacggcacaaatgctg
ggagttgctcggaacacattatatagaaaaatgaagcggtttggcattgactttcatgat
tatgggaaaactgtttaa
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