Pelosinus fermentans: JBW_04570
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Entry
JBW_04570 CDS
T03813
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pft
Pelosinus fermentans
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_04570
Enzymes [BR:
pft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JBW_04570
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JBW_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AJQ29899
UniProt:
I9NUY0
LinkDB
All DBs
Position
complement(5128066..5131518)
Genome browser
AA seq
1150 aa
AA seq
DB search
MKLRLMIGRAGAGKTQYCLEEMGQMLAASPEGRSMIMILPEHATFQVEHELASNPDIAGF
TRAYVFGFRRLAHRVLMETGGAVRPHITELGKRIVLNKLLHDHQADFKIFHRAAAQRSFA
DILVSMIQEFKAYGVSPESLAEVEEQCADLPIGDKLHDLALVYQGFEKFLQGRYTDPEDY
LTLLAEKIPQSAILHQAQVWIDGFTWFNPQEAGVVAQLLQNSASVTITLCLADAKSGEQA
SETALFHRQWDTRRKLLDMARKIGAEVEEVELVQTKRFSAPLLGHMEEQLFTFPSTVWTG
EVRGVVVTEAANRRVEIEGMARDMLRLVREEGYRWRDIGVLLRSGDSYAELVETVLADYE
IPFFSDRKRQPVHHPLAELLRSVLEVITERWSYDPLFRCFKTDLFDLSRDDIDKLENYVL
EFGIRGTKWTNGQPWTFIRRFSLGEDEELNEVQQEQLQSINEIRMKASAPLIVFEQQMKA
ATTVLAMTTALYEFLVGLMVPEKLEVWAVHAEEIGDLEQAREHRQLWDQVIQLMEQLVEI
CGAEEMKAVDYGIMLSEGLEGLTLSLIPPGLDYVTVSPMEQTSLVNIRSIYIPGVNDGVL
PMRGRGEGLLTDAERGQMIQLGLELAPGSQSDSFAERFLVYTALTRSRDYLWLSYPLADE
EGKGLSPSLLIKRVRELAAVPFHSLPVEPVPGSERQYIAHGKRSISSLAAVLRSYKSGEA
IASVWWDVYNWAIQHQGLEWYVQRAVAGLFHHNQVESLPGNLARRLYPKKNKLRGSVTRF
ESYQACPFKHFAQYGLSLKERAVFRLQAPDWGQFLHAALKGFGDSLQEAGRDWGSMSEGE
YKEIVNQVVEELAPKLQNEILLSSEQHKHLVGRLKRTVTRAVRRLVEFDRVSTFKPMAME
KSFGRGDDALPPLVYMLPDDISLEIVGQIDRLDVADLEGKKYMLIIDYKSGGAWLKLVDV
YYGLRLQLLTYLLVASKAYEDCLPAGVLYYFLKNPNLSDKIKLDADEICKKINGLLKMPG
WVLADSQVIRLLDQSIDGYSEFLKVALKKDDTFYSNCLSYVKEPEEFQLLLRHVEKKLVD
TAREIMEGNIAISPYALDKRTPCGFCQYSSVCQFDSLLPENQYRRLAKPDESSIMGKIIQ
GQEVKPDELV
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcttcgtttaatgataggaagggctggggctggtaagacccagtattgtttagag
gaaatgggtcagatgctggcggcatcaccagagggacggtctatgatcatgatcttgccg
gagcatgctacctttcaggtggagcatgagctggcatccaatcctgacattgctggcttt
acgagggcctatgtctttggttttcgccgtttagcacatcgggttttaatggaaacgggt
ggtgcggttcgtcctcatattacggaactggggaaacgaatcgtattgaataaattgctg
catgatcatcaagcagattttaagatctttcatcgggcggctgctcagcgaagttttgcc
gatattttagtcagtatgattcaggaatttaaagcttatggtgtatcaccagagtctttg
gcggaagtggaagaacagtgtgcggatttgccgattggtgataaacttcatgatttagcc
ttagtatatcaaggttttgagaaatttttgcaagggcgttatacggatcctgaagactat
ctcaccttgctggcagagaagattcctcagtctgcaattttgcatcaggcccaggtgtgg
attgatggttttacctggtttaatccccaggaggcaggtgtggtggcacagctattgcag
aattctgccagtgtaaccattaccttgtgtttggcagatgccaagtctggtgagcaggct
agtgagacggccttgtttcatcgccagtgggatacacggcggaagctattggacatggca
aggaaaataggggcagaggttgaggaagtggaattagttcagactaagcgctttagtgct
ccacttcttgggcatatggaagagcagttatttacctttccttctacggtttggacggga
gaagtgcgaggcgtagtggtaacagaggctgccaatcgccgggtagaaatcgagggtatg
gcacgagatatgctgcgtttagtccgagaggaaggctatcgctggcgggatattggagtt
ttgcttcggagtggggatagttacgctgaacttgtagagacagtgctggctgattatgag
ataccttttttcagtgatcgcaaacgtcagccggtacatcatcccttagcagaattattg
cgttctgttttagaagtgatcacggaaaggtggagttatgatccgctgtttcgctgtttt
aagacggatttatttgatctgtctcgggatgatattgataaattggaaaactacgtattg
gagtttgggattcgcggtacaaaatggaccaatggtcagccctggacatttattcgtcgt
ttttcattaggggaagatgaggagttgaatgaagtgcagcaggagcagctgcagtccatt
aatgagattaggatgaaagcctctgcgcctttgattgtctttgagcagcagatgaaagct
gcaactacggtactggcgatgacgacggccctatatgaatttctagtggggttgatggtg
cctgaaaagctagaagtgtgggcggttcatgccgaagaaatcggggatctggagcaggca
cgggagcatcgtcagttatgggaccaagtcattcagttaatggaacaactggtggaaatc
tgcggagcagaagaaatgaaggcagtcgattatggaattatgctcagtgaaggcttggaa
ggattgaccctcagtctcatacctcctggacttgattatgttactgtttctcccatggag
cagaccagcttggtaaacattcgaagtatttatatcccaggcgtaaacgatggggtattg
cccatgcgtggtcgcggtgagggtttattaacggatgccgagcgaggtcagatgatccag
ctgggactggaattagcacccggttctcaatcggattcttttgctgagcggtttttggtt
tatacagctttaacaaggtcgagagactatttgtggctgagctatcctctggcagatgaa
gaaggcaaggggctaagcccatcccttttgatcaaacgggtgcgagaattggcagccgta
ccctttcattccttgcctgtagaacctgtaccgggaagtgaacgacaatatatcgctcat
gggaagcgcagtatttcctccttagcggctgtgcttcgcagctacaagagcggcgaggca
attgctagtgtgtggtgggatgtttataattgggcgatacagcatcagggactggagtgg
tatgtgcagcgcgcggtagcaggactgtttcatcacaaccaagtagaatccctgccagga
aatttggcgagacgtttatatccgaagaagaataagcttaggggcagcgtcactcgtttt
gaatcctatcaggcttgtcccttcaagcactttgctcaatatggacttagtctcaaggaa
cgagcggtttttcgcttgcaggctcctgactggggacagtttttgcatgctgctctcaaa
ggatttggcgacagcctgcaagaggccgggcgggattggggcagtatgagcgaaggagaa
tacaaggaaattgttaatcaagtggtagaagaactggccccaaagctgcaaaatgagatt
ttattaagttcagagcagcacaagcatttggtgggcagactgaaacggacggtgacccgt
gcagtgcgtcggctggtggaatttgaccgagtaagtacctttaaacccatggcaatggaa
aagtcatttggtcggggggatgatgcgctgccgcctctcgtttatatgctgccagatgat
atttccttggaaatagtggggcagattgatcgtttggatgttgccgatttagaaggcaag
aaatatatgctcatcattgattataagtcagggggcgcttggctgaaattggtggatgtg
tattatggactgcggctgcagttattaacctacctattggtagcgagtaaggcgtacgaa
gattgtctgcccgcaggagtgctgtattatttcttaaagaatccgaacttatccgataag
ataaaactggatgcagatgaaatatgcaaaaaaatcaatggcctgttgaagatgccgggc
tgggtcttagcagattctcaggtcatacggctattggatcaaagcattgacggctattca
gaatttttgaaggtcgccttgaaaaaggatgataccttttatagcaattgcttatcttat
gtcaaagagccagaagaatttcaattgctactccgtcatgtagagaagaaattagtggat
acggcacgggaaattatggaggggaacattgcaattagtccttatgccttagacaaacga
acgccatgcggattttgtcagtatagttcagtgtgccagtttgacagtttattaccggaa
aatcagtaccgcagactggcaaagccggatgagagtagtattatggggaaaattatccag
ggacaggaggtgaaacccgatgagttggtctga
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integrated database retrieval system
