Pelosinus fermentans: JBW_04599
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Entry
JBW_04599 CDS
T03813
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pft
Pelosinus fermentans
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_04599
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JBW_04599
Archaeal homologous recombinant proteins
JBW_04599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
T2SSE
AAA_16
AAA_11
nSTAND3
AAA_22
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AJQ29928
UniProt:
I9DJP7
LinkDB
All DBs
Position
complement(5154777..5157830)
Genome browser
AA seq
1017 aa
AA seq
DB search
MRPLCLTMTAFGPYAQQQKLDFRELQDRTFFLIHGPTGSGKTTILDGMCFALFGDASGTQ
REGKSMRSDHADSAVITEVIFDFTIGEACYQVKRIPEQERPKKRGEGTTTMLAQAELWSM
PLVGEPILLAAKWLDVTKQIETLLGFKSSQFRQVVLLPQGEFRKLLTANSNERQEIMQAL
FKTDLYQRIEEKLKDKALQLKKASDEQSKQRQWILQEAGVAQDYELLDSIQQNEREVENV
LVQIKSISEELKSAQQAVNQGEIIQGKIQEKQKAEQLFATLIEQKPIIEEERAGLLQATA
AMGLFDAEKNRSNYAQDVLSLEENCKTYKAELDIEMQKLKEAQQRFEIEAAKDEEREMLV
RQIIHLQQIEDKIKLLEKALETATIRKSELQQAAKKKDAVELEYTKIQEKMDHIIQEEQQ
VVQLALEVGSREVQWQHAQGLLTKSRLLEEHRKKFTQLEQQVSASDLNLAELEKNYAAAK
SSLTTLQHEWMQGQAAFMASSLAAGESCPVCGSADHPKLATLRGIMPNESQLKTAQKQIE
LLEQERDTCRSQHSLLQTERDTWKKRIADLAGELKEQAALPLLELDLKVQTLRQKYEQAL
VGEQQVRNVTKQLEQLRKQQEDLHKELVQVQEAWRQAEQSFTAAETIVAERRLAIPEELQ
GMGKLAAALKSAQNKQEQYKAAWEQAQHHVQQGKQLVTQKQTLLENTKYRLKDSKIKYEE
EQNYFVKRVAAAGFMDQQDYENAKKSPESMSLTAKKIAAFDSEFSKATLFLEQAAQAAEN
LELPDMLGLQQVVTTMQNRYNDMFAAHTNLEALLKRQQAWLKKISQVDEALGTLEAQYAV
AGRLAEVANGSNEHKLTLQRFVLGTLLENVIVAANERLKMMSRSRYSLQRTLERARKNAA
GGLDLEVFDNYTGIARGVGTLSGGETFLASLSLALGLADVVQSYAGGIHLDTILVDEGFG
TLDPESLDFAIKALIDLQQGGRLVGIISHVPELKERIDARLEVMATERGSTACFKIG
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattatgtttaactatgacggcttttggcccctatgcgcaacagcaaaaactt
gattttagggaattgcaggatcgaacatttttcttgattcatggccccacaggatcagga
aaaacgacaattttagatggtatgtgctttgccttgtttggtgatgccagcggcacgcag
cgtgaaggaaaatccatgcgcagcgatcatgccgatagtgctgtaattacagaagtgatt
tttgattttacgattggcgaagcttgttatcaagtaaaacgaattccagagcaggagcgg
cctaagaaacggggagaaggcaccaccactatgctggcacaagctgaattgtggagtatg
cctttagtgggtgaacctattttgctggcagccaaatggctggacgttacgaagcagatt
gaaacactgctaggctttaagagcagccaatttcgtcaagttgtgctgctgcctcaaggt
gaatttcgtaaattattaactgctaactccaatgaacggcaagaaattatgcaggcatta
tttaaaacagacctatatcaaaggattgaggaaaaattaaaggacaaggctctacagcta
aaaaaggcgagtgatgaacagagcaaacagcgtcagtggattttgcaggaagccggcgta
gcgcaagattatgaactgctggattctatacagcaaaatgaaagggaagtagaaaacgta
ctcgttcagattaaaagtatcagtgaagaattaaaaagtgctcaacaggctgtgaaccaa
ggggaaatcatacagggaaaaattcaagaaaaacaaaaagcagagcaattatttgcgacg
cttatcgagcaaaagccgatcatcgaagaagaacgagcaggtctcctgcaggcaacggcg
gcaatgggcttgttcgatgcagaaaagaatcgatcgaactatgctcaggatgtactgtcg
ttggaagagaactgtaagacttataaggctgagctggatattgagatgcagaagctaaaa
gaggcacagcagcggtttgaaatagaagctgctaaagacgaagagcgggaaatgctggtt
cggcaaatcatccatttacagcagattgaggataaaataaaactactggaaaaagcctta
gaaacagcaacgataagaaaaagtgaactgcagcaggcagcaaagaaaaaagatgctgtt
gaactcgaatatacgaagatacaagaaaagatggaccatatcattcaagaagaacagcaa
gttgttcaacttgcgttagaagtgggcagcagggaagtacaatggcagcatgcccaagga
ttgcttacgaaaagtagacttctagaggaacataggaaaaaatttacccagctagaacag
caagtttctgcttctgacctgaatttagcagagcttgagaaaaactatgcggctgctaaa
agcagtctcaccacattgcagcatgaatggatgcaagggcaggcagctttcatggcaagt
tccttggcagcaggagagagctgccctgtctgtggttcagcggatcatcctaagctggcc
actcttagaggaatcatgccgaatgaaagtcagttgaaaacggctcaaaagcagatcgaa
cttctggaacaagaaagagatacttgccgcagtcagcacagtttgctgcaaaccgagagg
gatacatggaaaaaacggattgccgatcttgctggagaacttaaagagcaagctgcatta
cctttgctagagttagatctaaaagttcagactctgcgtcaaaagtatgagcaagccttg
gttggagaacagcaggtcaggaatgtgactaagcagttggagcagttaagaaaacaacaa
gaggacctgcataaggaattggttcaggtgcaagaagcgtggcgtcaggcagaacagtct
tttacagccgcagaaaccatagtggcagaaaggcgtcttgcgatacccgaggaactgcaa
gggatggggaaattggcagcagccctaaaaagtgcccaaaataagcaagagcaatataaa
gcagcctgggaacaagctcagcatcatgtacagcagggaaagcagctggtaacccagaag
cagacactcttggaaaataccaaatatcgcttaaaagacagcaagataaaatatgaagag
gaacaaaactattttgtaaaacgagtagcagcagctggatttatggatcagcaagactat
gagaatgcgaaaaagagtccagagagtatgagtcttactgcaaaaaaaattgctgccttt
gattcagaatttagtaaagccactctgttcctggaacaggctgcccaggcagcggaaaat
ctggaattaccggatatgctggggttgcagcaagtagttacaactatgcaaaatcgatat
aatgatatgtttgctgcacacacgaatctagaggcacttctaaaacgtcagcaagcttgg
ttgaaaaagatcagtcaagtggatgaggccttagggacattagaagcccaatatgctgtg
gcaggacgtttggcagaagtggctaatggcagcaatgagcacaaattaacgttgcagcga
tttgttttaggaacgttattagaaaatgtaattgtggcagcgaatgaacgtttaaaaatg
atgagccgcagccgttattccctgcagcgaaccctggagcgagccagaaaaaacgctgct
ggtggtttggatctagaggtttttgacaactatacaggcattgccagaggcgtggggacc
ctttccgggggtgagaccttcttagcatctttgtcattagctttaggtttagctgatgtt
gttcagtcctatgcaggcggcatacatttagatacaatcttagtagatgagggctttggt
actcttgatccagaatccttagattttgctatcaaggctttaatcgatttgcagcagggg
gggcgactggtggggattatttctcacgttcctgaactaaaggaaagaatagatgcccgc
ttagaagttatggcaacagaaagaggcagcacagcctgttttaaaattggttaa
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