Pyrococcus furiosus DSM 3638: PF0022
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Entry
PF0022 CDS
T00075
Name
(GenBank) putative RNase E
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
pfu
Pyrococcus furiosus DSM 3638
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfu03009
]
PF0022
Ribosome biogenesis [BR:
pfu03009
]
Prokaryotic type
rRNA processing factors
PF0022
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GFIT
Motif
Pfam:
DUF402
RNase_E_G
S1
HupF_HypC
Motif
Other DBs
NCBI-ProteinID:
AAL80146
UniProt:
Q8U4Q7
A0A5C0XLZ0
Structure
PDB
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Position
complement(24499..25908)
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AA seq
469 aa
AA seq
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MSTESEIAVRIRGIYSTALTKLLMDRGFKIVQPSDVIAERFGIEKSYEDFDVDIYDKNHG
VTIVGTKVEAVKKVFEEEFIDVFFRKLPYKLHGIYKGLVVKRDDRFVYVDIGNVIGTVLI
EELPDAAEGDEVVVQVKKHNVLPHLSTLITIPGDYAVLIPKPIGVQRHVKISRKIKDPEE
RERLRILGLSVDLGEWGVLWRTAAAYKDWNTLRDELVRLSKIADKLKEAEKFSAPAEIIE
GREIYEIEFGGGVKKKLDEIRNEVVPTIEGHHQFKSYDPEFTLAVDVAEGILAKLPSQRQ
KISKGFLEAIITSKGPKVGWIFTLNHVKPDGQIIKIGPGEVIEVSTDPLKVTIKRYLRPG
KFYDGLEVPIESGDYAITEIEAGKWWFVHRYYDKDGNLKGEFYNINTPVEIYPDKARYVD
LEVDIVRWPDGKKEIIDKEKLKEHYEEGIISEKLYKATLRIAQEVYDRL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacagaatcagaaatagcggtgaggataaggggaatatatagcacggccctaaca
aagctcctaatggacaggggtttcaagatagtacagccaagcgacgtgatagctgagagg
tttggaattgagaagagctatgaggactttgacgtcgacatctacgacaaaaaccacggt
gtgacaatcgttggaaccaaagtggaggcggtgaagaaggtctttgaggaggagtttatt
gacgtcttttttagaaagctcccctataagctccatggaatttacaaggggcttgtggtg
aaaagagatgacaggtttgtttatgtagatattgggaatgttattggaacggttctcata
gaggagcttccagatgctgccgaaggggatgaagttgttgttcaagtgaagaagcacaac
gtcctcccacacctaagcaccttaataacaatcccgggtgactatgcagtgctgattcca
aagcccataggagttcagagacacgtgaagatttccagaaagataaaggatcccgaggaa
agggaaaggttgagaatcctgggactaagtgttgatcttggagagtggggtgttctctgg
agaactgctgccgcttacaaggattggaacacgttaagggatgaactagtgaggctttca
aaaattgcagataagctgaaggaggcagagaagttctcagctccagcagagataatagag
gggagggaaatttacgagattgaattcggtggtggagtcaagaaaaagcttgatgagatt
aggaatgaagttgttcccacaattgaagggcaccaccagttcaagtcctacgacccagag
tttacattagctgtagatgtcgcagaggggattctggcaaaactcccgtcccagaggcag
aagataagtaaaggatttctagaagctataattaccagtaaaggaccaaaggttggttgg
atattcacgctgaaccacgtgaaacctgatgggcagataataaagattggcccaggggaa
gtaatagaggtatccacggatcctttaaaagtgacaataaagagatatctaaggccagga
aagttctatgatggactggaagtgccaatagagagtggagattacgcaataactgaaata
gaggctggaaagtggtggtttgttcacagatactatgataaagatggcaaccttaaggga
gagttctacaacatcaacacccctgtggagatctatccagataaggcaagatatgtggat
ctagaggtcgacatagtgaggtggccagacggaaagaaggagatcatagataaggagaag
ctaaaggaacactacgaggagggaattattagtgagaagctctataaggcaacgctgagg
attgcccaggaggtctacgacaggctctaa
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