Pyrococcus furiosus DSM 3638: PF0027
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Entry
PF0027 CDS
T00075
Name
(GenBank) putative integral membrane transport protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pfu
Pyrococcus furiosus DSM 3638
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfu03016
]
PF0027
Enzymes [BR:
pfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PF0027
Transfer RNA biogenesis [BR:
pfu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PF0027
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF2680
DUF1045
Nmad5
Cnd1
Phage_ORF13_CC
CRISPR_Cas2
ACT_AHAS_ss
Motif
Other DBs
NCBI-ProteinID:
AAL80151
UniProt:
Q8U4Q3
A0A5C0XM93
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(34545..35099)
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AA seq
184 aa
AA seq
DB search
MRAFIAIDVSESVRDALVRAQDYIGSKEAKIKFVERENFHITLKFLGEITEEQAEEIKKI
LEKIAKKYKKHEVNVRGIGVFPNPNYVRVIWAGVENDEIIKKIAKEIDDELAKLGFKKEG
NFVAHITLGRVKFVKDKLGLAMKLKELANEDFGSFIVEAIELKKSTLTPKGPIYETLARF
ELSE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgtttatagctatagacgttagtgagagcgttagggatgcacttgttagggct
caagactacataggatcaaaggaagccaagataaagttcgtcgagagggaaaactttcac
ataactctaaagtttctgggagaaatcacagaagagcaggcagaagaaatcaagaaaatc
cttgagaaaattgccaaaaagtacaagaagcacgaagtcaatgttaggggaataggagtc
tttccaaatcccaattatgtgagagttatctgggctggagttgaaaatgatgaaataata
aagaagatcgccaaggaaatagatgatgagctagcaaaactcggctttaaaaaggagggc
aactttgtggcccacataacccttggaagggtaaagtttgttaaagacaagctcggcctt
gccatgaagcttaaggaactcgcaaatgaagacttcggttccttcatagttgaggcaatt
gaactaaaaaagagcactctaacccccaagggcccaatatatgaaacactagcaagattc
gaattaagcgaatag
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