Pyrococcus furiosus DSM 3638: PF0933
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Entry
PF0933 CDS
T00075
Name
(GenBank) DNA repair helicase rad3, putative
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pfu
Pyrococcus furiosus DSM 3638
Pathway
pfu03022
Basal transcription factors
pfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PF0933
09124 Replication and repair
03420 Nucleotide excision repair
PF0933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfu03021
]
PF0933
03036 Chromosome and associated proteins [BR:
pfu03036
]
PF0933
03400 DNA repair and recombination proteins [BR:
pfu03400
]
PF0933
Enzymes [BR:
pfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PF0933
Transcription machinery [BR:
pfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PF0933
Chromosome and associated proteins [BR:
pfu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PF0933
DNA repair and recombination proteins [BR:
pfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PF0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_30
YwzD
AAA_35
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AAL81057
UniProt:
Q8U2A6
LinkDB
All DBs
Position
complement(895395..897290)
Genome browser
AA seq
631 aa
AA seq
DB search
MEELQYFPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLGY
KVVYLARTHKQMDRVIEELKKIRERNEVSGIEFRSRRDLCLHSYIQTFVQDAYTSMIVCK
TLRKLGKCPFFENIKEKRDRVEEIVRFFLNSPPFPHEVLEYSELLELCPYEITKKIGEKA
NVIVASYLYMISPPIRQAFLENLGVDYSDLIVIFDEAHNLPDQAISALSDRLSIRSIERA
IKEAEEYGEKDIENFLSILLRGLEILYKEKLENYESEEVPIRPEEVFLHVASVLGWSGRE
IGMMLEDMIEVGDAIREDRIERNLPPRSYVGRVGEFLWNWLALREREDYLHLFTKERGLA
LELVALDPSVALEFLEEVHSAIFMSGTLSPLEAFRDIIGVKAELKKFPRMIKRENAIVLV
ARDVSTRGIERSPSLYRRISEYIFEAVRNTPKNVGVFTASYEVLEGILSTNVHIKIEEEI
GKKVFIEKRDAPSRENDEMIRAFKEESKGKGAVLFGVMGGRNSEGQDYSGDEMNGVVLVG
IPYARPTPRVQAQIRYFEKKFPGKGRYYGYVLPAHRKLTQAAGRVHRSEEEKGSIVILDY
RVLWKSVKKDLPDWMVETMIPVTLPHYENKT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctacagtactttccctacgagaggttaaggccaaatcagcgagaatttata
gaaattgtgaaagaagctgtaaaaagaggggaaaaccttattgttgaagctcccactgga
tttggaaaaactataagcgttttagctggagtccttccctatgcaatctctttaggctat
aaagttgtgtacctggctagaactcataagcagatggatagagtaatagaggagctcaaa
aaaattagggaaaggaatgaagttagcggaattgaattcaggagtagaagggacttatgt
cttcactcctacatccaaacatttgtccaagatgcctacactagtatgatagtctgtaaa
accctaagaaaattgggaaagtgcccattctttgaaaatataaaagagaaaagagacaga
gtggaggagatagtgagatttttcctgaactctcctccttttccccatgaggttctcgaa
tacagcgaattacttgagctctgcccctacgaaattacgaagaaaattggagagaaagct
aatgttattgtagcgagctacctgtatatgataagccctccaataaggcaggctttctta
gaaaacttaggtgtggattactcagatttgatagttatatttgacgaggctcacaactta
cctgaccaagcaatttctgcacttagtgataggctaagcataaggagcatagagagggcc
attaaggaggccgaagagtacggagaaaaggacattgagaatttcctctcaatactccta
aggggattggagattctatacaaagaaaagctggaaaattatgaaagtgaagaagtcccg
ataaggccagaagaagtgtttcttcacgtagcttccgttttgggatggagtggaagggaa
atcggcatgatgttggaagatatgattgaagttggagatgcaattagggaggatagaata
gagagaaacctcccccctagaagctatgttggaagggtgggagagtttctgtggaattgg
cttgcccttcgagagagggaagattaccttcacctctttacaaaagagagaggacttgcg
ttggagttagtagcattagatccctcagtagccctcgaattccttgaagaggttcactct
gcaatattcatgtccggaactcttagccctttggaggcatttagagatataataggagtt
aaagcagagttaaagaagtttcccaggatgataaagagagaaaatgcaatagttcttgtg
gcgagagacgtgtctacaagggggatagagagaagcccatccctttatagaagaatttcg
gaatacatatttgaggcagtaagaaataccccaaaaaatgttggagttttcacagcttcc
tatgaagttcttgaaggaattctaagcaccaatgtccacataaaaattgaagaagagata
gggaaaaaggtctttatagagaagagagatgcaccgtcaagagagaatgacgaaatgata
agagcattcaaagaagaatccaaagggaagggagcagtattatttggcgttatgggggga
aggaacagtgaagggcaagactactccggagatgaaatgaacggtgttgtcttagttggg
ataccctatgcaaggcccacacctagagtccaggcccaaattagatactttgagaagaaa
ttcccagggaaggggaggtattatgggtacgttttgccagcccacagaaagctcacccaa
gctgcggggagagttcataggtctgaagaggagaagggaagcatagtcattttagactat
agagttttatggaaaagtgttaagaaagatcttcctgactggatggttgagacaatgatt
cctgtaaccctcccccactatgagaataaaacttag
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