Pyrococcus furiosus DSM 3638: PF1165
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Entry
PF1165 CDS
T00075
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfu
Pyrococcus furiosus DSM 3638
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfu03400
]
PF1165
DNA repair and recombination proteins [BR:
pfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PF1165
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AAL81289
UniProt:
Q8U1P0
A0A5C0XRC1
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All DBs
Position
1111866..1113521
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AA seq
551 aa
AA seq
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MEEFVGIVRGEASFTSYEFSINPSANVSFGEFVVTKNRDGDLVLGTVRHVKNVNWLLSSV
KSNFNSLALDIEEYGESLGENEEVVATVRILGKIEGNELVPNRVPIRNGEYVYKASDDLL
QMIYGNDGIEIGTLLLRPNVRIKLDVNELVSRHFAVLAVTGAGKSNAVAVIIKGIVEDVG
GTVVVLDPHGDYVNLRLPETGIDLVNIIDGKIRIEDLDPEELADLIGISSSAQIQRHFLS
LAWETVKHKNQSLGGESLLEALLDLLNEWISRKTIKYWSEKEGRMKSEDLKSERIETIRG
IIFRIRRFLRNYGNIVTSENLVAAIKPGMVNVIDLSPLDENQMKVVVGKFLEAVFEKRVE
YEMARKRFEKETSKKKRDEYEEIMTEIESKYPALAYPILVIVEEAHIFAPQGEENDAMRI
MGRIAREGRKFGVGLGVVSQRPSKLNEDILSQMNTKIILRIVNPRDQDYVLKASEQLSKD
LMDDIAGLGKGEAVIVGQAIKLPALVRIYNFKELRGKAGTGQYGGEDIGILDRWNKMKRN
MVNSLDIDIDF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattcgttggaattgtaaggggggaagcgagcttcacaagttatgagttttca
ataaatccctccgcaaacgtttcatttggagagtttgtagtcactaaaaatagagatggt
gatctagttctaggtaccgtaaggcatgtaaaaaatgttaactggttattgtcatctgta
aaaagcaattttaactctcttgcattagatatagaggaatatggagaaagtttaggagag
aacgaagaggttgtagcaactgttagaattttaggaaagatcgagggaaatgagcttgtt
ccaaatagagttccaataagaaatggggaatacgtctataaggcttcagatgatctcctt
caaatgatttacgggaatgatggaatagagattggaactttactcttaaggccgaatgtt
agaataaaacttgatgttaacgaactcgtttccagacattttgcagttttagctgttaca
ggtgctggaaagagcaatgcagttgccgtcattataaagggaatagtggaggatgtcgga
gggactgttgtagttttagaccctcatggggactatgtgaacctaagacttcccgagaca
ggaatagatttggtaaatatcattgatggaaagattagaattgaggatctagatccagaa
gagcttgcagatttaattggaatctcttcctcagcccaaattcaaagacacttcttgtct
ttggcttgggaaactgttaaacataaaaatcaaagcctcggaggggagtcacttcttgag
gccctcttggacttattaaacgaatggataagcaggaaaacgataaagtattggagtgaa
aaagaaggaagaatgaaaagtgaagacttaaagagcgaaagaattgaaactattagaggg
ataatatttaggattagaaggtttctaagaaattatggaaacatcgtgaccagtgaaaat
cttgtcgcagcaataaaacctggaatggtcaatgttattgatttgagtccccttgatgaa
aaccagatgaaggttgttgtcggaaagttccttgaagcagtctttgagaagagagttgaa
tatgaaatggccagaaaaaggtttgaaaaagaaacaagtaagaaaaaaagagatgagtac
gaagaaatcatgacagaaatagaaagcaagtatcctgctttagcttatccaattcttgta
atagttgaagaagcccacatctttgctccccaaggagaggaaaacgatgcgatgaggatt
atgggaaggattgcaagagaaggaagaaagtttggcgtgggtttaggtgtagtttcccag
aggccaagtaagcttaatgaggacatactaagtcagatgaacacaaagataatccttaga
atagtcaatcccagggatcaagattacgttctcaaggctagtgagcaactaagcaaagat
ctaatggatgatatagcaggtttagggaagggcgaggccgttattgtgggacaagccatt
aagctaccagcacttgttaggatttataacttcaaagagttaagaggaaaagctggaaca
ggtcaatatggaggagaagatatagggatccttgatagatggaataagatgaagagaaat
atggtgaattcgctagacattgatattgacttttga
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