Pyrococcus furiosus DSM 3638: PF1167
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Entry
PF1167 CDS
T00075
Name
(GenBank) smc-like protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfu
Pyrococcus furiosus DSM 3638
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfu03400
]
PF1167
DNA repair and recombination proteins [BR:
pfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PF1167
Archaeal homologous recombinant proteins
PF1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_21
AAA_29
AAA_13
Mce4_CUP1
SbcC_Walker_B
ABC_tran
ABC_ATPase
HMBD
Snapin_Pallidin
DUF5082
DUF6011
DUF1664
RsgA_GTPase
DUF5679
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AAL81291
UniProt:
P58301
Structure
PDB
LinkDB
All DBs
Position
1114820..1117468
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AA seq
882 aa
AA seq
DB search
MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDE
FTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAIS
AFMEKLIPYNIFLNAIYIRQGQIDAILESDEAREKVVREVLNLDKFETAYKKLSELKKTI
NNRIKEYRDILARTENIEELIKENEQELIQVLQEISKIEEVLPSKRSKVDMLRKEVLRLE
ETKVEIENSERLLEKRRGDKRTLEERIKNTEEYLEKLKEKEKELEEQVKEITSIKKDVDA
YLALKEFKNEYLDKKYKIEKELTRVEELINEIQKRIEELNEKESEKEKLENEKKEILNKL
AILEKDHQLYEEIKAKKENLRQLKEKLGDKSPEDIKKLLEELETKKTTIEEERNEITQRI
GELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDR
KSELERELRRIDMEIKRLTPLLTVAEQIRSIEEELNVVNLEKIEKNATEYEKLLEELRTL
EGRIRGLAEDLKKLAPLEKKLAALIHKKQELEKELKELNTKLESFGFKSVEDLDSKLREL
EEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKKLSQLKQKYN
EEEYKKKREEKEELEKELARLEAQKKELEKRRDTIKSTLEKLKAEKENRERVKKEIKDLE
KAKDFTEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFV
VWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIM
ERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVEVVS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggagagagtgactgtgaaaaactttaggtctcatagcgatactgttgtagaa
tttaaggagggcattaacttaataattggtcaaaatggatccggaaagagttcccttcta
gatgcaatccttgtcggcctttactggcctctgagaattaaagatatcaaaaaagacgag
ttcacaaaggttggagcaagggacacatacattgacttaatttttgagaaagatggtact
aaatacaggataacccgaagatttttgaaaggttactcctcaggagaaattcatgctatg
aaaaggcttgtaggaaatgaatggaagcatgtaacggagccaagctcaaaggccatatcc
gcttttatggaaaaacttatcccgtacaacatattcctgaatgccatctacatcaggcag
ggacaaattgatgccatacttgagagcgatgaggctagagagaaggttgtcagagaagtt
ttaaatctagacaagtttgagactgcatacaagaagctttccgaactaaagaaaactatc
aacaatagaataaaggagtacagagatatccttgcaaggacagaaaacatagaggagctg
ataaaagaaaatgaacaagagcttattcaagttctccaagagatatcaaagatagaggaa
gtgcttcccagtaaaaggtcaaaggttgatatgcttaggaaagaagtcctaagacttgag
gaaacaaaggtggagatagaaaacagtgagcgtttgctagaaaaaagaagaggagataag
agaactcttgaagagagaataaaaaacactgaggaatacttagagaagttaaaagaaaaa
gaaaaggagcttgaagagcaagttaaagaaatcaccagcataaagaaagatgttgatgca
tatctggccctaaaagagttcaaaaatgagtacctggataaaaaatataagatagaaaaa
gagctgactagagtagaagagctaattaatgagattcagaagagaatcgaggaactcaat
gagaaggaatcagaaaaggagaagctcgaaaacgagaaaaaagaaatactaaacaagcta
gctattctcgaaaaagatcaccaattgtatgaagagataaaagcaaagaaagaaaattta
aggcaattaaaagaaaagcttggagacaagtctcctgaagacattaagaaattactagag
gaactagagactaagaaaacaacaatagaagaggagagaaatgaaataacccagaggatt
ggagaacttaaaaacaaaataggggatctaaaaacggcaatagaagagctcaaaaaagct
aaaggaaagtgtccagtatgtggaagagagttaacggatgagcatagagaagagctacta
tctaaatatcacctcgatcttaacaatagcaaaaatactttagccaaactaatcgataga
aaaagcgagctcgaaagagaacttcgaagaatagatatggaaataaagcgattaacgcct
cttctaacagtagctgaacaaatacgatctattgaagaagaattgaatgtagtgaacctc
gagaaaatagagaaaaatgccacggagtatgaaaagcttttagaagagttgcgcacccta
gagggtagaattaggggccttgcagaagacctgaaaaagctagctcccctagagaagaag
ctggccgctcttatccataaaaagcaagaactagaaaaagaattgaaagagcttaacact
aagctagagtcttttggattcaaatcagttgaagatcttgactctaaactaagagaatta
gaggagatctacaaaaggtatcttaccctgttaaattcaaagaaagaactcgaaataacc
caaagggaaatcgccaaagctaaggaaactttggagatgagcttcgaagaacttgctgaa
gtagaggcggacattgaaaggatagaaaagaaacttagccagctaaaacagaaatacaac
gaagaggaatacaagaagaagagagaagaaaaggaggaactagaaaaagagctggctaga
cttgaagctcaaaagaaagagttagaaaagaggagagacacaataaaatctacgctggaa
aagctaaaagctgaaaaagaaaacagagaaagagtaaagaaagaaattaaagacctagaa
aaagctaaagatttcacagaagagttgattgagaaagttaagaagtacaaggccttggca
agggaggccgctctcagcaagattggagaacttgccagtgaaatattcgcagaatttact
gagggtaagtattcggaagttgtagtgagggccgaagagaataaggtaaggttatttgtt
gtgtgggaaggaaaagaaaggccactaacgtttctcagcggaggggaaaggatagccctt
ggattggcatttaggttggcaatgtccctatacctagcgggagagataagcctcctgatt
ttagatgagccaacgccttatttagatgaggagagaagaagaaagctcatcacgatcatg
gagaggtacttaaagaagattccacaagtaatcctcgtctctcacgatgaagaactcaag
gatgccgcagatcacgtgattaggataagccttgaaaatggatcctccaaggtggaggtg
gtctcttga
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